Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 MTND4P8-201ENST00000514997 1362 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 RNU6-272P-201ENST00000411028 104 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 GTF2IP5-201ENST00000414608 731 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 EIF4EP1-201ENST00000422311 642 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 AP001324.1-201ENST00000428553 399 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 MTCO1P43-201ENST00000431831 488 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC006466.1-201ENST00000438721 289 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 RPL7P55-201ENST00000450522 746 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 OR52J1P-201ENST00000450596 932 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 SBDSP1-204ENST00000453858 737 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 RPL35AP28-201ENST00000459730 331 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 RPS17P2-201ENST00000461663 408 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 AP000873.1-201ENST00000463987 400 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 RPL21P47-201ENST00000483696 477 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 RNU4-60P-201ENST00000517239 135 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 GCSHP4-201ENST00000538792 439 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC006213.5-201ENST00000619673 288 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC097460.3-201ENST00000623099 442 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 CR381572.2-201ENST00000624852 397 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC011978.2-201ENST00000569835 2054 ntBASIC4.58□□□□□ -1.68
VMP1Q96GC9 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.58□□□□□ -1.68
VMP1Q96GC9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VMP1Q96GC9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC068446.1-201ENST00000556425 1549 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 SDAD1P1-202ENST00000524156 2051 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 MIR1183-201ENST00000408856 89 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 EIF4HP2-201ENST00000424380 563 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC007559.1-201ENST00000428736 355 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 OR51AB1P-201ENST00000429046 620 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AL513175.1-201ENST00000431492 780 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 RPL23AP33-201ENST00000442301 452 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 MTND1P33-201ENST00000446251 917 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC091685.2-201ENST00000454924 864 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC092324.1-201ENST00000468671 324 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC015724.1-201ENST00000478577 156 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC093755.1-201ENST00000512950 1023 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 IGLVIV-53-201ENST00000520107 367 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 UBTFL9-201ENST00000534504 1148 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AP003717.3-201ENST00000544832 1180 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.57□□□□□ -1.68
VMP1Q96GC9 BNIP3P32-201ENST00000600015 554 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC020910.3-201ENST00000603701 874 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AL031320.1-201ENST00000604177 357 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AC104687.2-201ENST00000604442 342 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 FAM25E-202ENST00000608562 189 ntBASIC4.57□□□□□ -1.68
VMP1Q96GC9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms