Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC103591.2-201ENST00000265259 766 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 RNA5SP435-201ENST00000364044 108 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AL078604.1-201ENST00000404609 466 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 RN7SKP206-201ENST00000410823 293 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 RN7SKP273-201ENST00000411392 314 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC004022.2-201ENST00000413824 193 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 UBE2V1P9-201ENST00000414760 368 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AL355433.1-201ENST00000422804 300 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC092647.3-201ENST00000443044 633 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 MTND1P33-201ENST00000446251 917 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC010733.1-201ENST00000451515 401 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC234781.3-201ENST00000452540 973 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 Z95152.1-201ENST00000453556 656 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC117394.1-201ENST00000477323 567 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC008953.1-201ENST00000497334 318 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC140172.1-201ENST00000502928 141 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 OR51K1P-201ENST00000510214 950 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 PRELID3BP4-201ENST00000515476 571 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC022832.1-201ENST00000530718 645 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 OR5AN2P-201ENST00000534535 896 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC007424.1-203ENST00000554613 687 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC023824.3-201ENST00000569003 562 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC006116.3-201ENST00000592968 361 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AL121932.1-201ENST00000605542 214 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC008966.2-201ENST00000606157 453 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC018645.2-201ENST00000609151 472 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 MIR6768-201ENST00000610734 72 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 EIF3FP1-201ENST00000613970 806 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC022467.1-201ENST00000614738 749 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC006927.2-201ENST00000639256 389 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 LINC01739-205ENST00000641890 573 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 AL139811.1-201ENST00000424779 2299 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 KARSP3-201ENST00000571212 1504 ntBASIC4.1□□□□□ -1.75
RFT1Q96AA3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RFT1Q96AA3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.1□□□□□ -1.75
RFT1Q96AA3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFT1Q96AA3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFT1Q96AA3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFT1Q96AA3 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RFT1Q96AA3 RNA5SP513-201ENST00000364648 118 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 RHOT1P2-201ENST00000366423 333 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC234772.1-201ENST00000377927 937 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 MIR93-201ENST00000385024 80 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 RNU1-82P-201ENST00000390851 165 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AP002530.1-201ENST00000405705 684 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 RNA5SP239-201ENST00000410218 129 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC069282.1-201ENST00000411911 526 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC004552.1-201ENST00000419089 348 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC115285.1-201ENST00000424879 736 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RFT1Q96AA3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 AC002542.1-201ENST00000440683 193 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.09□□□□□ -1.75
RFT1Q96AA3 AL929288.2-201ENST00000446368 407 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 SEPT14P24-201ENST00000447236 180 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 PPIAP20-201ENST00000449839 135 ntBASIC4.09□□□□□ -1.75
RFT1Q96AA3 AL645939.1-201ENST00000453429 797 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms