Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPL10P17-201ENST00000453852 316 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 RN7SL329P-201ENST00000467740 299 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 RPS3AP22-201ENST00000488297 769 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.52□□□□□ -1.53
HPS3Q969F9 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 RNA5SP392-201ENST00000516905 112 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AC105031.1-201ENST00000518550 476 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.52□□□□□ -1.53
HPS3Q969F9 AC087808.1-201ENST00000520501 361 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.52□□□□□ -1.53
HPS3Q969F9 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.52□□□□□ -1.53
HPS3Q969F9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HPS3Q969F9 AC091515.1-201ENST00000548110 679 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.52□□□□□ -1.53
HPS3Q969F9 AC116553.2-201ENST00000564203 463 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HPS3Q969F9 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.52□□□□□ -1.53
HPS3Q969F9 AC011840.5-201ENST00000582125 771 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AC011447.4-201ENST00000587562 111 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.52□□□□□ -1.53
HPS3Q969F9 AL390838.2-201ENST00000602394 274 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AC091488.1-201ENST00000604239 660 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AL390816.3-201ENST00000604527 1066 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 MEMO1P5-201ENST00000604810 406 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AL133507.1-201ENST00000605269 557 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.52□□□□□ -1.53
HPS3Q969F9 AC080013.3-201ENST00000606839 578 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.52□□□□□ -1.53
HPS3Q969F9 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.52□□□□□ -1.53
HPS3Q969F9 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC5.52□□□□□ -1.53
HPS3Q969F9 AF001550.2-201ENST00000636643 217 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 OR2L1P-202ENST00000641567 1023 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HPS3Q969F9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.52□□□□□ -1.53
HPS3Q969F9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HPS3Q969F9 CASC19-204ENST00000641001 2055 ntBASIC5.52□□□□□ -1.53
HPS3Q969F9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.52□□□□□ -1.53
HPS3Q969F9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
HPS3Q969F9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HPS3Q969F9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
HPS3Q969F9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
HPS3Q969F9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 DCAF13P3-201ENST00000561147 1334 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
HPS3Q969F9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HPS3Q969F9 AL049737.1-201ENST00000413920 1403 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.51□□□□□ -1.53
HPS3Q969F9 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HPS3Q969F9 RNA5SP443-201ENST00000363083 132 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 RNU6-839P-201ENST00000363347 108 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 RNA5SP507-201ENST00000363603 121 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 RNU4-40P-201ENST00000364351 143 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 BMS1P3-201ENST00000372011 932 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 SNORD116-8-201ENST00000384365 95 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 VDAC2P1-201ENST00000399358 958 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.51□□□□□ -1.53
HPS3Q969F9 RNU2-50P-201ENST00000410494 143 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 NRBF2P2-201ENST00000413087 861 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.51□□□□□ -1.53
HPS3Q969F9 AC009965.2-201ENST00000425328 970 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.51□□□□□ -1.53
HPS3Q969F9 RPS26P40-201ENST00000435209 294 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.51□□□□□ -1.53
HPS3Q969F9 AC093155.1-201ENST00000440164 826 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 ELOCP10-201ENST00000440624 327 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.51□□□□□ -1.53
HPS3Q969F9 AL354714.3-201ENST00000447284 493 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.51□□□□□ -1.53
HPS3Q969F9 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.51□□□□□ -1.53
HPS3Q969F9 AC069304.1-201ENST00000491593 704 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 COX6B1P5-201ENST00000509843 249 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AC116353.3-201ENST00000511215 249 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AC008837.2-201ENST00000513076 418 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AC008494.2-201ENST00000514544 370 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 RNA5SP135-201ENST00000517019 125 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.51□□□□□ -1.53
HPS3Q969F9 HIGD1AP6-201ENST00000521833 279 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.51□□□□□ -1.53
HPS3Q969F9 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.51□□□□□ -1.53
HPS3Q969F9 AC092490.3-201ENST00000545370 572 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HPS3Q969F9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.51□□□□□ -1.53
HPS3Q969F9 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.51□□□□□ -1.53
HPS3Q969F9 AC079171.1-201ENST00000568788 914 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AC008088.1-201ENST00000580993 280 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.51□□□□□ -1.53
HPS3Q969F9 ELOCP34-201ENST00000604436 327 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AC093799.2-201ENST00000610062 578 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.51□□□□□ -1.53
HPS3Q969F9 AC124312.6-202ENST00000623624 418 ntBASIC5.51□□□□□ -1.53
HPS3Q969F9 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.51□□□□□ -1.53
HPS3Q969F9 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.51□□□□□ -1.53
HPS3Q969F9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms