Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 OR8G5-201ENST00000524943 1041 ntBASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 MIR4429-201ENST00000580105 73 ntBASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 AP001160.4-201ENST00000596971 382 ntBASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 AC018618.2-201ENST00000604770 446 ntBASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 AC067852.7-201ENST00000623270 535 ntBASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 AC009452.1-201ENST00000640823 606 ntBASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 AC134882.1-201ENST00000603738 1676 ntBASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HDDC3Q8N4P3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.53□□□□□ -1.69
HDDC3Q8N4P3 AL592182.3-201ENST00000642132 3304 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 RNU1-87P-201ENST00000363727 170 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AP000357.1-201ENST00000409926 1165 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 MTND2P15-201ENST00000418575 892 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 RPL23AP38-201ENST00000423801 469 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 RPL23AP43-201ENST00000446445 471 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 RPS7P7-201ENST00000463499 571 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 SAP18P1-201ENST00000512058 390 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AC026616.1-201ENST00000523157 525 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 ADAD1P2-201ENST00000588476 646 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AC069304.3-201ENST00000603938 1084 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AL356490.1-201ENST00000623079 479 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 AC006065.6-201ENST00000625201 545 ntBASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HDDC3Q8N4P3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 CPHL1P-201ENST00000461341 3407 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 SNORA62.3-201ENST00000365110 153 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 RNU6-98P-201ENST00000384173 107 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AL022722.2-201ENST00000402519 180 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 XKRYP4-201ENST00000414395 483 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 HSFY6P-201ENST00000445573 403 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 XKRYP5-201ENST00000449659 483 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AC012671.1-201ENST00000451912 203 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 RN7SL98P-201ENST00000462271 300 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AP002812.1-201ENST00000495378 474 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 MTATP6P22-201ENST00000507369 598 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 MTCO1P49-201ENST00000523429 802 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 OR8R1P-201ENST00000543943 764 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 RN7SL176P-201ENST00000580352 264 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AC090617.9-201ENST00000623751 147 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 SAGE2P-201ENST00000420011 2126 ntBASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDDC3Q8N4P3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.5□□□□□ -1.69
HDDC3Q8N4P3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HDDC3Q8N4P3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.5□□□□□ -1.69
HDDC3Q8N4P3 MAPK10-286ENST00000641208 8747 ntBASIC4.5□□□□□ -1.69
HDDC3Q8N4P3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HDDC3Q8N4P3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
HDDC3Q8N4P3 METTL21EP-201ENST00000298105 713 ntBASIC4.5□□□□□ -1.69
HDDC3Q8N4P3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HDDC3Q8N4P3 OR56B2P-201ENST00000317102 954 ntBASIC4.5□□□□□ -1.69
HDDC3Q8N4P3 RNU1-130P-201ENST00000363930 160 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms