Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AL161631.1-201ENST00000417933 486 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC073335.1-201ENST00000427776 363 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 SKP1P3-201ENST00000429280 487 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 CASP3P1-201ENST00000446037 609 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC104306.1-201ENST00000449702 371 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 NPM1P39-201ENST00000449818 867 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 RN7SL385P-201ENST00000468873 276 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 NPM1P17-201ENST00000479221 602 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC108145.1-201ENST00000503770 153 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC025459.1-201ENST00000504072 156 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 KCTD9P2-201ENST00000512203 1013 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC108471.1-201ENST00000513977 287 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 RNU6-1004P-201ENST00000516584 111 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 snoU109.6-201ENST00000516831 118 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AF186190.1-201ENST00000517470 480 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AP003730.1-201ENST00000524605 285 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 SULT1C2P2-201ENST00000562517 294 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AL391834.1-201ENST00000609609 560 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC110792.4-201ENST00000609843 298 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AP004607.9-201ENST00000618202 316 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC010300.1-201ENST00000600671 5134 ntBASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
C9orf40Q8IXQ3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 RNU1-15P-201ENST00000353977 144 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 SNORA70.2-201ENST00000364506 135 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 RNU6-650P-201ENST00000365658 111 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 GCNT6-201ENST00000379591 934 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 RNU6-225P-201ENST00000384613 103 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 RPS27AP11-201ENST00000402798 447 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 VN1R8P-201ENST00000407739 893 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 RBMY1KP-201ENST00000423480 476 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 RPL23AP38-201ENST00000423801 469 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 COX6B1P7-201ENST00000430845 235 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 PRELID3BP10-201ENST00000431957 584 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 MTCYBP21-201ENST00000443300 1113 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC079804.1-201ENST00000461922 436 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 RPL23AP2-201ENST00000471227 466 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 RPS29P19-201ENST00000479709 171 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 PPM1AP1-201ENST00000502740 1135 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC002456.2-201ENST00000509356 380 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC027338.1-201ENST00000514840 825 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 RNA5SP154-201ENST00000516193 111 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 MRPL49P2-201ENST00000521066 465 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC090281.1-201ENST00000523019 276 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 OSBPL9P3-201ENST00000534523 595 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 AC008083.2-201ENST00000546707 476 ntBASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.92□□□□□ -1.78
C9orf40Q8IXQ3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms