Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL592293.2-201ENST00000422292 996 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 RPL23AP38-201ENST00000423801 469 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 AC093084.1-201ENST00000424233 687 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 AC011742.1-201ENST00000431448 434 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 RPS4XP4-201ENST00000443195 763 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 TPT1P13-201ENST00000449760 499 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 FCF1P7-201ENST00000451185 558 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 EIF2S2P4-201ENST00000461070 984 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 RPL23AP2-201ENST00000471227 466 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 RN7SL459P-201ENST00000481078 302 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 RPS27AP13-201ENST00000498403 237 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 AC113398.2-201ENST00000507630 558 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 AC009643.1-201ENST00000532030 391 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 AL645927.2-201ENST00000618350 349 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 CASC19-284ENST00000642142 1868 ntBASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.17□□□□□ -1.74
CDKL3Q8IVW4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AL136964.1-201ENST00000622038 2990 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 RNU6-304P-201ENST00000364855 107 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 RNU6-225P-201ENST00000384613 103 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 MIR141-201ENST00000384975 95 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AC073464.3-201ENST00000422564 712 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AC096638.2-201ENST00000434965 711 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 MORF4L1P4-201ENST00000450245 976 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 OR6C72P-201ENST00000451403 892 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AC009220.1-201ENST00000451614 275 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AC092691.2-201ENST00000461787 803 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AC105918.1-201ENST00000474399 838 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AC091167.1-201ENST00000492017 396 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 HPRT1P2-201ENST00000505250 544 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 PSMA6P4-201ENST00000603247 718 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AL592494.3-201ENST00000609485 464 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AP005212.4-201ENST00000614206 710 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 uc_338.32-201ENST00000615087 172 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 MIR8059-201ENST00000620427 81 ntBASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDKL3Q8IVW4 AC005261.4-201ENST00000600047 1385 ntBASIC4.15□□□□□ -1.74
CDKL3Q8IVW4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CDKL3Q8IVW4 AL356317.1-201ENST00000396110 1436 ntBASIC4.15□□□□□ -1.74
CDKL3Q8IVW4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CDKL3Q8IVW4 RNU11-4P-201ENST00000391149 133 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC016397.1-201ENST00000412463 242 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC087650.1-201ENST00000431445 468 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 YWHAEP5-201ENST00000431545 765 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 RPL7AP52-201ENST00000458096 790 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 RPL21P71-201ENST00000465598 459 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 RFPL1S-203ENST00000539579 330 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 CBX3P5-201ENST00000552017 521 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC006116.5-201ENST00000591936 559 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AF230666.2-201ENST00000602328 725 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC008745.1-201ENST00000604064 271 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AL591424.2-201ENST00000617023 128 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 MIR4727-201ENST00000622232 55 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 MIR6810-201ENST00000622701 70 ntBASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDKL3Q8IVW4 AC008725.1-201ENST00000605123 2263 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms