Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC023825.1-201ENST00000566704 1030 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 MIR3667-201ENST00000581025 74 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC011453.2-201ENST00000603737 729 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC005191.1-201ENST00000603950 358 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC024940.4-201ENST00000605507 246 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 BX323046.1-201ENST00000610145 535 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 FAM27B-201ENST00000610601 213 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC234782.5-201ENST00000617723 324 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AL022401.1-201ENST00000619498 108 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AL669942.2-201ENST00000620352 697 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC126544.2-201ENST00000625174 749 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 SALL4P2-201ENST00000423288 2910 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 AC011978.2-201ENST00000569835 2054 ntBASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUP54Q7Z3B4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 RNU5B-4P-201ENST00000363508 111 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 RN7SKP103-201ENST00000363848 320 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 RNU6-925P-201ENST00000384629 104 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 MIR153-1-201ENST00000384914 90 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 DNAJC19P6-201ENST00000401853 280 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 MIR1271-201ENST00000408537 86 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC092745.2-202ENST00000411880 369 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AL139128.1-201ENST00000413921 941 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 LINC00993-201ENST00000420453 540 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 RPL37P1-201ENST00000432310 284 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 NRBF2P3-201ENST00000432731 865 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC008072.1-201ENST00000434254 824 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC068135.1-201ENST00000446164 246 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AP000926.1-201ENST00000479573 241 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC008494.2-201ENST00000514544 370 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 RNU1-6P-201ENST00000516290 144 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC133555.2-201ENST00000550213 292 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC095057.3-201ENST00000567102 1157 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC011492.1-201ENST00000600023 315 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC008536.1-201ENST00000602872 669 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AL512782.1-201ENST00000603093 364 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AL391358.1-201ENST00000605342 190 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AL121890.3-201ENST00000618494 516 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC022079.2-201ENST00000619739 566 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC004808.1-201ENST00000627671 721 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AL596275.2-204ENST00000641628 552 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AL596275.2-206ENST00000641957 626 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 NOL8P1-201ENST00000508336 3529 ntBASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NUP54Q7Z3B4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 XIAPP3-201ENST00000312918 795 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 SNORA70E-201ENST00000384492 135 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 RNU6-932P-201ENST00000391108 106 ntBASIC4.42□□□□□ -1.7
NUP54Q7Z3B4 U3.30-201ENST00000391308 210 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms