Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 AL669831.5-218ENST00000591702 1873 ntBASIC3.02□□□□□ -1.93
VPS13CQ709C8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS13CQ709C8 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS13CQ709C8 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 UBTFL3-201ENST00000418934 1024 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 AL121890.1-201ENST00000435457 205 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 UBTFL6-201ENST00000477929 1024 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 RPL23AP69-201ENST00000431134 458 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 RPL21P110-201ENST00000433345 446 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 AC128716.1-201ENST00000475129 166 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 AC023141.12-201ENST00000512399 199 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 RNU1-41P-201ENST00000516161 162 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 RNU1-48P-201ENST00000516400 162 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 SNORA70.17-201ENST00000516449 133 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VPS13CQ709C8 AC096644.3-201ENST00000416788 338 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 RPL23AP25-201ENST00000430973 463 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 AC067852.3-201ENST00000589177 561 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 AL031658.2-201ENST00000616850 651 ntBASIC3.01□□□□□ -1.93
VPS13CQ709C8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.01□□□□□ -1.93
VPS13CQ709C8 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 SKP1P3-201ENST00000429280 487 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3□□□□□ -1.93
VPS13CQ709C8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3□□□□□ -1.93
VPS13CQ709C8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3□□□□□ -1.93
VPS13CQ709C8 COX6B1P6-201ENST00000522347 255 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 AC092747.2-201ENST00000545069 983 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 AC091544.4-201ENST00000555268 342 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3□□□□□ -1.93
VPS13CQ709C8 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3□□□□□ -1.93
VPS13CQ709C8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 RNA5SP50-201ENST00000363731 107 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 MIR195-201ENST00000385194 87 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3□□□□□ -1.93
VPS13CQ709C8 RPL5P18-201ENST00000406671 891 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3□□□□□ -1.93
VPS13CQ709C8 OOSP1P1-201ENST00000423265 274 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3□□□□□ -1.93
VPS13CQ709C8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3□□□□□ -1.93
VPS13CQ709C8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 AP001153.1-201ENST00000641024 338 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VPS13CQ709C8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3□□□□□ -1.93
VPS13CQ709C8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
VPS13CQ709C8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3□□□□□ -1.93
VPS13CQ709C8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
VPS13CQ709C8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3□□□□□ -1.93
VPS13CQ709C8 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3□□□□□ -1.93
VPS13CQ709C8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3□□□□□ -1.93
VPS13CQ709C8 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3□□□□□ -1.93
VPS13CQ709C8 AL359219.2-201ENST00000555184 348 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 AL121576.1-201ENST00000556055 276 ntBASIC3□□□□□ -1.93
VPS13CQ709C8 AC008759.1-201ENST00000589783 983 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms