Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 OR6E1P-201ENST00000414424 923 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC048351.1-201ENST00000420064 602 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 GAPDHP58-201ENST00000438477 1006 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 DNAJB5P1-201ENST00000454004 806 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 MTCO2P18-201ENST00000457151 658 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC048346.1-201ENST00000510247 144 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 RNU6-513P-201ENST00000516104 104 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 RNU6-941P-201ENST00000516346 108 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 MIR3936-201ENST00000584304 110 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AL390838.2-201ENST00000602394 274 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AL390816.3-201ENST00000604527 1066 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC008083.4-201ENST00000615076 444 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 BX005214.3-202ENST00000619809 325 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC073869.10-201ENST00000642016 354 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AC119744.1-201ENST00000454746 1715 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 AL672167.1-204ENST00000641875 3017 ntBASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTCHD4Q6ZW05 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AL390237.1-201ENST00000404226 1415 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 RNU5D-1-201ENST00000363299 116 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 RN7SKP292-201ENST00000365522 317 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 RNU6-1300P-201ENST00000391046 108 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AC099535.1-201ENST00000408928 371 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AL031779.1-201ENST00000415663 330 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 BMS1P17-202ENST00000416720 316 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 RPS3P2-201ENST00000421346 701 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 RPL34P3-201ENST00000421454 338 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 DLGAP5P1-201ENST00000430307 464 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 MTCO3P21-201ENST00000430791 643 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AL050321.1-201ENST00000432363 400 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 NOP56P2-201ENST00000447491 769 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 TPMTP4-201ENST00000450749 678 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 BX842559.2-201ENST00000451418 605 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 MTCO3P16-201ENST00000454456 754 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 ACTG1P13-201ENST00000486987 1043 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 RPS6P4-201ENST00000494693 758 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AC112198.1-201ENST00000505369 1220 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 TCP11X3P-202ENST00000514289 1254 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 RN7SKP31-201ENST00000516354 278 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 SCARNA16.4-201ENST00000516956 187 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 RN7SKP283-201ENST00000517197 270 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 NRBF2P4-201ENST00000520874 850 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 COX6B1P6-201ENST00000522347 255 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AP004607.2-201ENST00000533949 322 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 BNIP3P1-201ENST00000547295 580 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AL049872.1-201ENST00000556323 322 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AC012435.1-202ENST00000568772 240 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AC011840.5-201ENST00000582125 771 ntBASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCHD4Q6ZW05 AF131215.7-201ENST00000602443 707 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms