Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC133552.5-201ENST00000604266 540 ntBASIC3.38□□□□□ -1.87
LRRK2Q5S007 AC091905.2-201ENST00000623143 306 ntBASIC3.38□□□□□ -1.87
LRRK2Q5S007 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRK2Q5S007 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRRK2Q5S007 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRRK2Q5S007 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 NMNAT1P2-201ENST00000435192 860 ntBASIC3.38□□□□□ -1.87
LRRK2Q5S007 Z75741.1-201ENST00000446793 314 ntBASIC3.38□□□□□ -1.87
LRRK2Q5S007 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 RFPL4AP5-201ENST00000514977 504 ntBASIC3.38□□□□□ -1.87
LRRK2Q5S007 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 MIR5004-201ENST00000579078 107 ntBASIC3.38□□□□□ -1.87
LRRK2Q5S007 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 AC112503.1-201ENST00000608436 391 ntBASIC3.38□□□□□ -1.87
LRRK2Q5S007 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 BTBD10P1-201ENST00000549824 1352 ntBASIC3.38□□□□□ -1.87
LRRK2Q5S007 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRK2Q5S007 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 RNA5SP51-201ENST00000364750 119 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 PEX12P1-201ENST00000400284 1048 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 AC079809.1-201ENST00000415468 276 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 FABP3P2-201ENST00000453169 399 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 RNA5SP303-201ENST00000516192 130 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRK2Q5S007 NCAPGP2-201ENST00000557911 754 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 QTRT1P1-201ENST00000604344 1078 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 AP005435.3-201ENST00000531260 3198 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRK2Q5S007 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRK2Q5S007 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRK2Q5S007 AP002001.2-201ENST00000529025 1469 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRK2Q5S007 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRK2Q5S007 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 AC127537.2-201ENST00000439258 465 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 AC090686.1-201ENST00000481577 749 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.37□□□□□ -1.87
LRRK2Q5S007 AL606834.2-201ENST00000602954 668 ntBASIC3.37□□□□□ -1.87
LRRK2Q5S007 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRK2Q5S007 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 AL080315.1-201ENST00000406055 466 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 RPL21P91-201ENST00000429231 479 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 BNIP3P41-201ENST00000503774 571 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 SUMO2P19-201ENST00000518920 295 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 CYCSP28-201ENST00000534284 321 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 RNU1-30P-201ENST00000606575 163 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 AC009159.1-201ENST00000618386 642 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 AL672167.1-204ENST00000641875 3017 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 Z74696.2-201ENST00000436514 498 ntBASIC3.36□□□□□ -1.87
LRRK2Q5S007 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
LRRK2Q5S007 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRK2Q5S007 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LRRK2Q5S007 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRRK2Q5S007 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.35□□□□□ -1.87
LRRK2Q5S007 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LRRK2Q5S007 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms