Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 AC080013.3-201ENST00000606839 578 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 AC109309.2-201ENST00000612597 332 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 MIR6862-1-201ENST00000613016 70 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 MIR6862-2-201ENST00000614755 70 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 AC022509.4-201ENST00000621404 572 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 AC022079.1-201ENST00000621546 602 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 AL355480.1-201ENST00000629041 99 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 AL049767.1-202ENST00000637826 242 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 AC005332.5-201ENST00000591222 2919 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 BRAFP1-201ENST00000445336 2703 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 DDX18P5-201ENST00000534547 1306 ntBASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RUNDC3AQ59EK9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC107027.3-201ENST00000565095 3473 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 ECM1P2-201ENST00000503354 1577 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 RNU6-582P-201ENST00000362989 107 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 SNORD116-23-201ENST00000384645 92 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 RN7SKP114-201ENST00000410327 279 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 MTND4P22-201ENST00000413116 1169 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 PPIAP17-201ENST00000438507 471 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 HMGB1P48-201ENST00000446155 598 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 EEF1A1P1-201ENST00000447052 739 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 RPL23AP15-201ENST00000450202 459 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 CYCSP34-201ENST00000458172 304 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC018638.3-201ENST00000461273 132 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AP000563.1-201ENST00000490865 758 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC113430.1-201ENST00000506872 718 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 MTCYBP16-201ENST00000509187 1129 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 RNA5SP360-201ENST00000516555 118 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC087808.1-201ENST00000520501 361 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC010198.2-201ENST00000550612 259 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 NBEAP1-201ENST00000554452 979 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AL354943.1-201ENST00000572103 781 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC011445.2-201ENST00000599274 173 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC021171.1-201ENST00000603137 706 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AL021707.7-201ENST00000607991 416 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC126323.6-202ENST00000568092 3511 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC009643.2-201ENST00000603543 1448 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 AC109315.1-201ENST00000584143 1347 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 OR51H2P-202ENST00000641424 3046 ntBASIC4.7□□□□□ -1.66
RUNDC3AQ59EK9 Z99496.1-201ENST00000469424 1477 ntBASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 SCARNA15-201ENST00000607520 4325 ntBASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 RNA5SP183-201ENST00000362452 119 ntBASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 Y_RNA.408-201ENST00000383987 102 ntBASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 AL592291.1-201ENST00000403830 352 ntBASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 PRRC2CP1-201ENST00000404428 159 ntBASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 RNA5SP80-201ENST00000410475 111 ntBASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 RN7SKP125-201ENST00000410481 302 ntBASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 RN7SKP293-201ENST00000411389 296 ntBASIC4.69□□□□□ -1.66
RUNDC3AQ59EK9 NRBF2P2-201ENST00000413087 861 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms