Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 RNU5A-4P-201ENST00000516588 111 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 IGKV2-36-201ENST00000519999 223 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AP000859.1-201ENST00000525536 307 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 BGLT3-201ENST00000564523 994 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC090751.1-201ENST00000566966 267 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AL354943.1-201ENST00000572103 781 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC209154.1-201ENST00000582156 337 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AL133507.1-201ENST00000605269 557 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AC131159.1-201ENST00000621854 213 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AP000676.3-201ENST00000623299 569 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AL731532.2-201ENST00000623542 1953 ntBASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SLC44A4Q53GD3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SLC44A4Q53GD3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
SLC44A4Q53GD3 AC011447.7-201ENST00000624228 1590 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 SDAD1P1-202ENST00000524156 2051 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC008079.2-201ENST00000623543 20396 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AL606537.1-201ENST00000607258 2011 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 FAM133CP-201ENST00000332869 704 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 SNORD113-6-201ENST00000363345 75 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 RNA5SP90-201ENST00000364801 99 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 RNA5SP428-201ENST00000365129 132 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 OR8V1P-201ENST00000395193 873 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AL590290.1-201ENST00000405336 380 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 SNORA11-201ENST00000408789 128 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 MTCO1P3-201ENST00000429327 192 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AL008629.1-201ENST00000438615 184 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 RPL23AP76-201ENST00000441860 458 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 HMGB1P16-201ENST00000447155 540 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 TPT1P12-201ENST00000448968 492 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 MTND2P26-201ENST00000528255 1029 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 OR4C2P-201ENST00000530855 1064 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AP006289.1-201ENST00000538089 277 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 MIR3912-201ENST00000577566 105 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC127024.5-201ENST00000580085 462 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC022662.1-201ENST00000580252 331 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC119751.7-201ENST00000600494 245 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC009027.1-201ENST00000604510 479 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC011939.3-201ENST00000613686 466 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AL353726.1-201ENST00000614041 1000 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC074140.1-201ENST00000621617 208 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC135068.5-201ENST00000624197 983 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC000374.1-201ENST00000434698 1745 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 MAPK10-349ENST00000641767 3661 ntBASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SLC44A4Q53GD3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms