Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 MIR3936-201ENST00000584304 110 ntBASIC5.34□□□□□ -1.55
CERKLQ49MI3 MIR3138-201ENST00000585238 82 ntBASIC5.34□□□□□ -1.55
CERKLQ49MI3 MIR6716-201ENST00000613413 80 ntBASIC5.34□□□□□ -1.55
CERKLQ49MI3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CERKLQ49MI3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CERKLQ49MI3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CERKLQ49MI3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 SALL4P2-201ENST00000423288 2910 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 OR5H2-201ENST00000355273 945 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 Y_RNA.169-201ENST00000363745 96 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 SNORD56.4-201ENST00000363883 71 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 SNORD116-8-201ENST00000384365 95 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 RNU6-31P-201ENST00000384388 108 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 AL049545.1-201ENST00000401856 572 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC008173.1-201ENST00000418901 264 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 PNRC2P1-201ENST00000423940 420 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC011998.1-201ENST00000433403 117 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 MRPL48P1-201ENST00000445390 636 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 RN7SL303P-201ENST00000469773 251 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 SYT14P1-201ENST00000481459 721 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 TPT1P3-201ENST00000492841 512 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC010486.3-201ENST00000511602 785 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 MIR4789-201ENST00000577469 82 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC114781.5-201ENST00000615297 108 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC015914.2-201ENST00000618167 288 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC078883.4-201ENST00000623218 367 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 OR2L1P-202ENST00000641567 1023 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC000374.1-201ENST00000434698 1745 ntBASIC5.33□□□□□ -1.56
CERKLQ49MI3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.33□□□□□ -1.56
CERKLQ49MI3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CERKLQ49MI3 AC133552.1-201ENST00000569988 4007 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CERKLQ49MI3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CERKLQ49MI3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CERKLQ49MI3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CERKLQ49MI3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CERKLQ49MI3 RNU1-130P-201ENST00000363930 160 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 Y_RNA.318-201ENST00000365131 97 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 OR6C69P-201ENST00000394268 893 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 MCTS2P-201ENST00000394552 546 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 AP002784.2-201ENST00000397300 549 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 RPL21P108-201ENST00000413857 481 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 XKRYP4-201ENST00000414395 483 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 AC016907.1-201ENST00000419483 435 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 RPS27P5-201ENST00000444247 244 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CERKLQ49MI3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 RPL23AP43-201ENST00000446445 471 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 XKRYP5-201ENST00000449659 483 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 PRDX3P4-201ENST00000470828 747 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 AC091951.3-201ENST00000504093 246 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 Y_RNA.688-201ENST00000516565 95 ntBASIC5.32□□□□□ -1.56
CERKLQ49MI3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.32□□□□□ -1.56
CERKLQ49MI3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms