Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 RNU6-549P-201ENST00000384433 107 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 RNA5SP397-201ENST00000391323 118 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AL049545.1-201ENST00000401856 572 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 GPS2P1-201ENST00000411761 986 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 TMX2P1-201ENST00000436507 708 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 CBX1P4-201ENST00000439415 457 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 FHP1-201ENST00000442741 703 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 SETD6P1-201ENST00000444575 317 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 PTGES3P5-201ENST00000455109 434 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC091959.2-201ENST00000477363 321 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 RPSAP51-201ENST00000497462 645 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 MTND4LP2-201ENST00000502312 285 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC073358.1-201ENST00000505671 684 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC091868.1-201ENST00000508746 304 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 RN7SKP122-201ENST00000515923 296 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 OR4U1P-201ENST00000554958 912 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC116553.2-201ENST00000564203 463 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AP001542.2-201ENST00000593141 364 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC069304.3-201ENST00000603938 1084 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC018695.5-201ENST00000605872 315 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC024060.1-201ENST00000607052 494 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AL121873.1-201ENST00000616013 524 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 ZNF663P-202ENST00000641770 1131 ntBASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM71Q2Q1W2 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 LINC00993-201ENST00000420453 540 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC234779.1-201ENST00000425910 285 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 TXNL1P1-201ENST00000429528 554 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 RPS24P8-201ENST00000431490 402 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 RPL34P6-201ENST00000432390 345 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 RPS26P30-201ENST00000443431 335 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AL929288.2-201ENST00000446368 407 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 ZNF886P-201ENST00000450781 723 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC009963.2-201ENST00000453431 138 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 RPL21P6-201ENST00000479171 504 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 MTCO3P35-201ENST00000485582 781 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 NIP7P2-201ENST00000485801 544 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC013356.1-201ENST00000489027 564 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC091860.1-201ENST00000505723 432 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC145350.1-201ENST00000567426 208 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 EIF1P6-201ENST00000600054 334 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 GAS5-AS1-201ENST00000602767 694 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC020910.2-201ENST00000603635 610 ntBASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM71Q2Q1W2 AC002487.1-201ENST00000604565 994 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms