Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC007687.1-201ENST00000602704 304 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AL445222.1-201ENST00000607259 628 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.09□□□□□ -1.43
PCDH1Q08174 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.09□□□□□ -1.43
PCDH1Q08174 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.09□□□□□ -1.43
PCDH1Q08174 AC015712.7-201ENST00000615211 635 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AC009237.17-201ENST00000618111 748 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 U1.31-201ENST00000620022 160 ntBASIC6.09□□□□□ -1.43
PCDH1Q08174 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH1Q08174 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH1Q08174 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH1Q08174 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDH1Q08174 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH1Q08174 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PCDH1Q08174 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.09□□□□□ -1.43
PCDH1Q08174 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.09□□□□□ -1.44
PCDH1Q08174 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDH1Q08174 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH1Q08174 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 CASC19-204ENST00000641001 2055 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 USP9YP4-201ENST00000424401 1745 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH1Q08174 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 ZBTB8OSP1-201ENST00000342688 498 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PCDH1Q08174 Y_RNA.46-201ENST00000362695 102 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 RN7SKP237-201ENST00000364663 301 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 Y_RNA.381-201ENST00000365666 102 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 RNU6-952P-201ENST00000391164 108 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PCDH1Q08174 RPS4XP8-201ENST00000402039 771 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AC234781.4-201ENST00000419384 244 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AKR1B10P1-201ENST00000425765 942 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AC104837.2-201ENST00000427236 424 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 RPS3AP38-201ENST00000435889 763 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 TUBB4BP6-201ENST00000437576 479 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 CBWD4P-201ENST00000445695 655 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AL136380.1-201ENST00000447970 162 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 BX842559.2-201ENST00000451418 605 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH1Q08174 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 AC233279.1-201ENST00000455300 423 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 VPS25P1-201ENST00000455691 508 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 RN7SL714P-201ENST00000487050 298 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 RNA5SP418-201ENST00000515951 117 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AC022616.6-201ENST00000520479 119 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 MIR212-201ENST00000586026 110 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 VN1R84P-201ENST00000593697 235 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AC243960.4-201ENST00000600532 288 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AC011468.4-201ENST00000603942 409 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AC008966.2-201ENST00000606157 453 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AC006924.1-201ENST00000610750 559 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 AL031658.2-201ENST00000616850 651 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH1Q08174 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AC108467.2-201ENST00000617640 1597 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 MTCO1P11-201ENST00000429111 1528 ntBASIC6.08□□□□□ -1.44
PCDH1Q08174 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PCDH1Q08174 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.08□□□□□ -1.44
PCDH1Q08174 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PCDH1Q08174 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
PCDH1Q08174 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.07□□□□□ -1.44
PCDH1Q08174 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms