Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
GABPAQ06546 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABPAQ06546 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABPAQ06546 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
GABPAQ06546 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
GABPAQ06546 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GABPAQ06546 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GABPAQ06546 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABPAQ06546 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
GABPAQ06546 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GABPAQ06546 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GABPAQ06546 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GABPAQ06546 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
GABPAQ06546 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GABPAQ06546 RN7SKP159-201ENST00000410657 292 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 OR5BE1P-201ENST00000425977 939 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 AL691449.1-201ENST00000426570 421 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.77□□□□□ -1.65
GABPAQ06546 AL591363.1-201ENST00000450091 483 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GABPAQ06546 RPS4XP15-201ENST00000489210 795 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 AC016550.3-201ENST00000515706 767 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.77□□□□□ -1.65
GABPAQ06546 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.77□□□□□ -1.65
GABPAQ06546 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.77□□□□□ -1.65
GABPAQ06546 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.77□□□□□ -1.65
GABPAQ06546 AC084759.1-201ENST00000561168 290 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.77□□□□□ -1.65
GABPAQ06546 AC026979.4-201ENST00000606555 645 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.77□□□□□ -1.65
GABPAQ06546 MIR7702-201ENST00000621931 59 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 OR5BE1P-202ENST00000641168 1176 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.77□□□□□ -1.65
GABPAQ06546 RLIMP2-201ENST00000427891 1563 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GABPAQ06546 AC016588.2-201ENST00000632484 3021 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 BTBD10P1-201ENST00000549824 1352 ntBASIC4.77□□□□□ -1.65
GABPAQ06546 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GABPAQ06546 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GABPAQ06546 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
GABPAQ06546 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
GABPAQ06546 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
GABPAQ06546 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.76□□□□□ -1.65
GABPAQ06546 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
GABPAQ06546 MT-TP-201ENST00000387461 68 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 HMGB3P19-201ENST00000403971 560 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 RPL5P19-201ENST00000404228 893 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
GABPAQ06546 CYCSP19-201ENST00000411715 316 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.76□□□□□ -1.65
GABPAQ06546 AL606490.7-201ENST00000433136 191 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 ZFAND6P1-201ENST00000434138 605 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.76□□□□□ -1.65
GABPAQ06546 MTCYBP29-201ENST00000436327 1006 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.76□□□□□ -1.65
GABPAQ06546 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.76□□□□□ -1.65
GABPAQ06546 GEMIN8P3-201ENST00000445417 720 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC005008.1-201ENST00000456151 612 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 SNORA84-201ENST00000459229 133 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC089999.1-201ENST00000460336 374 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC092691.2-201ENST00000461787 803 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 RPL5P13-201ENST00000462840 709 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC091959.2-201ENST00000477363 321 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 RN7SL132P-201ENST00000478131 296 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC110792.1-201ENST00000491826 472 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 RPL29P14-201ENST00000495837 428 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.76□□□□□ -1.65
GABPAQ06546 AC108157.1-201ENST00000510511 539 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 NDUFA5P2-201ENST00000519723 344 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 MTCO1P49-201ENST00000523429 802 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.76□□□□□ -1.65
GABPAQ06546 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.76□□□□□ -1.65
GABPAQ06546 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.76□□□□□ -1.65
GABPAQ06546 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
GABPAQ06546 HSPE1P5-201ENST00000561489 272 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC025627.2-201ENST00000576220 160 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.76□□□□□ -1.65
GABPAQ06546 AC084373.1-201ENST00000603311 235 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AL592436.1-201ENST00000605135 558 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 MIR432-201ENST00000606207 94 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.76□□□□□ -1.65
GABPAQ06546 AC034229.5-201ENST00000624258 185 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.76□□□□□ -1.65
GABPAQ06546 HPVC1-201ENST00000629899 1198 ntBASIC4.76□□□□□ -1.65
GABPAQ06546 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
GABPAQ06546 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
GABPAQ06546 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
GABPAQ06546 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GABPAQ06546 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
GABPAQ06546 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms