Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 AC009229.4-201ENST00000623854 1947 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 OR6C69P-201ENST00000394268 893 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 COX6CP17-201ENST00000421389 185 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 SEC63P1-201ENST00000425785 1258 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 BTF3P10-201ENST00000433415 495 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 RSL24D1P2-201ENST00000445584 366 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 AL451050.1-201ENST00000450126 415 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 CALM1P2-201ENST00000452941 448 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 IFNWP4-201ENST00000453148 294 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 UQCRHP4-201ENST00000471686 272 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 RNU6-319P-201ENST00000516025 108 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 DEFB109D-201ENST00000529497 240 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 GNRHR2P1-201ENST00000555315 631 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 HNRNPCP4-201ENST00000571636 900 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 AC023575.1-201ENST00000580510 358 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 MIR5684-201ENST00000585074 65 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 AC128687.2-201ENST00000609657 566 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 AC083809.1-201ENST00000615051 472 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 MIR7151-201ENST00000617477 60 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 AC114546.3-201ENST00000623582 1734 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 MIR6715B-201ENST00000637172 77 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 AL049555.1-201ENST00000562834 1933 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 AL592437.2-201ENST00000421655 2434 ntBASIC3.91□□□□□ -1.78
HMGCS1Q01581 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGCS1Q01581 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGCS1Q01581 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCS1Q01581 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCS1Q01581 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCS1Q01581 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.9□□□□□ -1.78
HMGCS1Q01581 AC022893.2-201ENST00000564832 3296 ntBASIC3.9□□□□□ -1.78
HMGCS1Q01581 MIR383-201ENST00000362257 73 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCS1Q01581 RNU6-146P-201ENST00000384602 108 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 RNU6-225P-201ENST00000384613 103 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 RPS20P25-201ENST00000412447 352 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC011742.1-201ENST00000431448 434 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 BX119904.1-201ENST00000432026 348 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC092013.1-201ENST00000438795 332 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 RPS4XP4-201ENST00000443195 763 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 TPT1P12-201ENST00000448968 492 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 RPL31P20-201ENST00000449593 360 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 NDUFS5P3-201ENST00000450668 321 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 HMGB3P22-202ENST00000451823 572 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC105137.1-201ENST00000484355 562 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCS1Q01581 HPRT1P2-201ENST00000505250 544 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC092593.2-201ENST00000513866 913 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCS1Q01581 SNORA48.9-201ENST00000516419 162 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC025627.2-201ENST00000576220 160 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 MIR3939-201ENST00000582614 106 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC006338.2-201ENST00000616864 791 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 AP006248.2-201ENST00000623309 592 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 MIR6830-201ENST00000636015 70 ntBASIC3.9□□□□□ -1.79
HMGCS1Q01581 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
HMGCS1Q01581 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCS1Q01581 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms