Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL392088.2-201ENST00000637607 285 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
HSPG2P98160 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 ZNF807-201ENST00000328088 1707 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC2.32□□□□□ -2.04
HSPG2P98160 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
HSPG2P98160 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HSPG2P98160 NMNAT1P2-201ENST00000435192 860 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 AL121890.1-201ENST00000435457 205 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.32□□□□□ -2.04
HSPG2P98160 AL163642.2-201ENST00000604722 1019 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 COX6CP4-201ENST00000605798 228 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 PCA3_2.1-201ENST00000612507 409 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 AL354976.1-201ENST00000613843 387 ntBASIC2.32□□□□□ -2.04
HSPG2P98160 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
HSPG2P98160 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC2.31□□□□□ -2.04
HSPG2P98160 SNORA44-201ENST00000384584 132 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.31□□□□□ -2.04
HSPG2P98160 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC2.31□□□□□ -2.04
HSPG2P98160 RPL32P28-201ENST00000443577 397 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.31□□□□□ -2.04
HSPG2P98160 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC2.31□□□□□ -2.04
HSPG2P98160 RNA5SP341-201ENST00000516261 117 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 COX6B1P6-201ENST00000522347 255 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC2.31□□□□□ -2.04
HSPG2P98160 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.31□□□□□ -2.04
HSPG2P98160 AC124312.6-202ENST00000623624 418 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 AC003985.2-201ENST00000562268 1669 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC2.31□□□□□ -2.04
HSPG2P98160 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HSPG2P98160 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
HSPG2P98160 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
HSPG2P98160 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
HSPG2P98160 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC2.31□□□□□ -2.04
HSPG2P98160 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 AC020656.2-201ENST00000613291 5309 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 SNORD9-201ENST00000362566 104 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 AC096644.3-201ENST00000416788 338 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 NPM1P25-201ENST00000429734 854 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 ZYG11AP1-201ENST00000430329 837 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.31□□□□□ -2.04
HSPG2P98160 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 RPL7P59-201ENST00000447700 943 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 RPL7P24-201ENST00000493052 752 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC2.31□□□□□ -2.04
HSPG2P98160 AC008694.2-201ENST00000517591 306 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC2.31□□□□□ -2.04
HSPG2P98160 NRBF2P5-201ENST00000603087 788 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
HSPG2P98160 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
HSPG2P98160 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 AC005183.1-201ENST00000603687 1979 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC2.31□□□□□ -2.04
HSPG2P98160 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 Y_RNA.238-201ENST00000364441 102 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.31□□□□□ -2.04
HSPG2P98160 KC877373.1-201ENST00000479066 408 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AC093815.1-201ENST00000508637 280 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.31□□□□□ -2.04
HSPG2P98160 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.31□□□□□ -2.04
HSPG2P98160 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC2.31□□□□□ -2.04
HSPG2P98160 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
HSPG2P98160 RNU4-35P-201ENST00000362588 141 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 RPS27AP15-201ENST00000447672 466 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.31□□□□□ -2.04
HSPG2P98160 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC2.31□□□□□ -2.04
HSPG2P98160 AC005086.4-201ENST00000623065 213 ntBASIC2.31□□□□□ -2.04
HSPG2P98160 SAMMSON-213ENST00000641336 1521 ntBASIC2.3□□□□□ -2.04
HSPG2P98160 AL022393.1-201ENST00000625142 1677 ntBASIC2.3□□□□□ -2.04
HSPG2P98160 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HSPG2P98160 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
HSPG2P98160 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HSPG2P98160 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HSPG2P98160 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HSPG2P98160 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HSPG2P98160 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC2.3□□□□□ -2.04
HSPG2P98160 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HSPG2P98160 MIR199A2-201ENST00000385289 110 ntBASIC2.3□□□□□ -2.04
HSPG2P98160 BX890604.2-201ENST00000427883 474 ntBASIC2.3□□□□□ -2.04
HSPG2P98160 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.3□□□□□ -2.04
HSPG2P98160 AL671855.1-201ENST00000446875 1203 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms