Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 MTND5P24-201ENST00000438892 1767 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AL672167.1-206ENST00000356293 943 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 RNU6-374P-201ENST00000364146 108 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
NKX6-1P78426 RNU6-146P-201ENST00000384602 108 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 SNORD116-4-201ENST00000384733 96 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 MIR649-201ENST00000384843 97 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 MIR585-201ENST00000384887 94 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 RNU1-149P-201ENST00000390870 161 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 SNRPEP2-201ENST00000397592 279 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AL133384.1-201ENST00000412744 351 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AL357752.1-201ENST00000412817 349 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 HSFY4P-201ENST00000415994 1181 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AL953862.1-201ENST00000423016 168 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AC234779.1-201ENST00000425910 285 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AC096632.1-201ENST00000427395 310 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 RPS27AP6-201ENST00000427962 448 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AL022331.1-201ENST00000429025 477 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 BMS1P19-201ENST00000433925 393 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC012075.1-201ENST00000436549 580 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 CEACAMP9-201ENST00000442990 513 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 KATNBL1P6-201ENST00000453433 915 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AC004129.2-201ENST00000457229 287 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 RN7SL72P-201ENST00000460697 269 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AC010683.1-201ENST00000473673 378 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AP000893.1-201ENST00000474462 794 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 RPL7P39-201ENST00000481157 744 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AL024509.2-201ENST00000493462 493 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AC091965.2-201ENST00000512324 613 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 RNU6-941P-201ENST00000516346 108 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 DEFB131D-201ENST00000526803 184 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX6-1P78426 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC073544.2-201ENST00000601155 540 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AC006363.1-201ENST00000603806 463 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AC106028.5-201ENST00000610332 395 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 MIR6748-201ENST00000610433 71 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 MIR6837-201ENST00000620884 64 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC107027.3-201ENST00000565095 3473 ntBASIC4.99□□□□□ -1.61
NKX6-1P78426 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
NKX6-1P78426 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX6-1P78426 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NKX6-1P78426 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX6-1P78426 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
NKX6-1P78426 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.98□□□□□ -1.61
NKX6-1P78426 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NKX6-1P78426 AL161756.3-201ENST00000641216 2071 ntBASIC4.98□□□□□ -1.61
NKX6-1P78426 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NKX6-1P78426 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX6-1P78426 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NKX6-1P78426 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NKX6-1P78426 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NKX6-1P78426 AC004076.2-201ENST00000620532 3323 ntBASIC4.98□□□□□ -1.61
NKX6-1P78426 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX6-1P78426 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NKX6-1P78426 AC008549.2-201ENST00000333482 706 ntBASIC4.98□□□□□ -1.61
NKX6-1P78426 RNU6-984P-201ENST00000363236 109 ntBASIC4.98□□□□□ -1.61
NKX6-1P78426 Y_RNA.194-201ENST00000363985 102 ntBASIC4.98□□□□□ -1.61
NKX6-1P78426 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NKX6-1P78426 RNU6-657P-201ENST00000383904 107 ntBASIC4.98□□□□□ -1.61
NKX6-1P78426 RNU6-921P-201ENST00000384361 107 ntBASIC4.98□□□□□ -1.61
NKX6-1P78426 MIR223-201ENST00000385204 110 ntBASIC4.98□□□□□ -1.61
NKX6-1P78426 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms