Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 BTF3P10-201ENST00000433415 495 ntBASIC3.64□□□□□ -1.83
LSM6P62312 AC093716.1-201ENST00000435923 377 ntBASIC3.64□□□□□ -1.83
LSM6P62312 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LSM6P62312 CEACAMP9-201ENST00000442990 513 ntBASIC3.64□□□□□ -1.83
LSM6P62312 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.64□□□□□ -1.83
LSM6P62312 EIF2S2P2-201ENST00000447161 982 ntBASIC3.64□□□□□ -1.83
LSM6P62312 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.64□□□□□ -1.83
LSM6P62312 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM6P62312 AC114982.2-201ENST00000461396 358 ntBASIC3.64□□□□□ -1.83
LSM6P62312 RPL7P1-201ENST00000468161 747 ntBASIC3.64□□□□□ -1.83
LSM6P62312 RPL7P9-201ENST00000468715 747 ntBASIC3.64□□□□□ -1.83
LSM6P62312 AC011037.1-201ENST00000483964 558 ntBASIC3.64□□□□□ -1.83
LSM6P62312 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM6P62312 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM6P62312 AC025554.1-201ENST00000505641 188 ntBASIC3.64□□□□□ -1.83
LSM6P62312 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LSM6P62312 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM6P62312 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.64□□□□□ -1.83
LSM6P62312 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM6P62312 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.64□□□□□ -1.83
LSM6P62312 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM6P62312 CR383656.6-201ENST00000550518 394 ntBASIC3.64□□□□□ -1.83
LSM6P62312 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.64□□□□□ -1.83
LSM6P62312 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM6P62312 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.64□□□□□ -1.83
LSM6P62312 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM6P62312 AC022655.2-201ENST00000577280 318 ntBASIC3.64□□□□□ -1.83
LSM6P62312 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.64□□□□□ -1.83
LSM6P62312 AC233309.1-201ENST00000619522 751 ntBASIC3.64□□□□□ -1.83
LSM6P62312 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.64□□□□□ -1.83
LSM6P62312 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LSM6P62312 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM6P62312 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LSM6P62312 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.64□□□□□ -1.83
LSM6P62312 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.64□□□□□ -1.83
LSM6P62312 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
LSM6P62312 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 HSPA8P1-201ENST00000425843 1833 ntBASIC3.63□□□□□ -1.83
LSM6P62312 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LSM6P62312 SNORA60-201ENST00000362396 134 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.63□□□□□ -1.83
LSM6P62312 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LSM6P62312 U3.22-201ENST00000391120 215 ntBASIC3.63□□□□□ -1.83
LSM6P62312 RPL23AP26-201ENST00000412728 464 ntBASIC3.63□□□□□ -1.83
LSM6P62312 PGBD4P8-201ENST00000412993 562 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AL592293.2-201ENST00000422292 996 ntBASIC3.63□□□□□ -1.83
LSM6P62312 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.63□□□□□ -1.83
LSM6P62312 COX6B1P7-201ENST00000430845 235 ntBASIC3.63□□□□□ -1.83
LSM6P62312 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.63□□□□□ -1.83
LSM6P62312 AL353093.1-201ENST00000441292 436 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.63□□□□□ -1.83
LSM6P62312 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.63□□□□□ -1.83
LSM6P62312 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.63□□□□□ -1.83
LSM6P62312 FABP3P2-201ENST00000453169 399 ntBASIC3.63□□□□□ -1.83
LSM6P62312 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 AC087385.1-201ENST00000475062 312 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM6P62312 AC041039.1-201ENST00000485656 536 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AF213884.1-201ENST00000488102 463 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AC091167.1-201ENST00000492017 396 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM6P62312 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.63□□□□□ -1.83
LSM6P62312 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 RNU7-143P-201ENST00000516781 65 ntBASIC3.63□□□□□ -1.83
LSM6P62312 IGKV2-38-201ENST00000517443 247 ntBASIC3.63□□□□□ -1.83
LSM6P62312 IGKV2D-23-201ENST00000518179 286 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AC009643.1-201ENST00000532030 391 ntBASIC3.63□□□□□ -1.83
LSM6P62312 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.63□□□□□ -1.83
LSM6P62312 AC091515.1-201ENST00000548110 679 ntBASIC3.63□□□□□ -1.83
LSM6P62312 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM6P62312 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.63□□□□□ -1.83
LSM6P62312 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.63□□□□□ -1.83
LSM6P62312 AC007599.1-201ENST00000568688 1174 ntBASIC3.63□□□□□ -1.83
LSM6P62312 MIR4277-201ENST00000578298 84 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AC110741.2-201ENST00000605278 268 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.63□□□□□ -1.83
LSM6P62312 MIR6820-201ENST00000611508 62 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AC114781.5-201ENST00000615297 108 ntBASIC3.63□□□□□ -1.83
LSM6P62312 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM6P62312 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 MIR3653-201ENST00000625572 110 ntBASIC3.63□□□□□ -1.83
LSM6P62312 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.63□□□□□ -1.83
LSM6P62312 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 LINC02471-203ENST00000641941 4752 ntBASIC3.63□□□□□ -1.83
LSM6P62312 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LSM6P62312 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LSM6P62312 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
LSM6P62312 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
LSM6P62312 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LSM6P62312 Y_RNA.62-201ENST00000362840 99 ntBASIC3.62□□□□□ -1.83
LSM6P62312 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.62□□□□□ -1.83
LSM6P62312 AL161909.1-201ENST00000397390 712 ntBASIC3.62□□□□□ -1.83
LSM6P62312 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms