Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 CYCSP40-201ENST00000575927 294 ntBASIC3.83□□□□□ -1.8
LMO4P61968 MIR548Y-201ENST00000582739 110 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.83□□□□□ -1.8
LMO4P61968 VN1R78P-201ENST00000597393 564 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.83□□□□□ -1.8
LMO4P61968 AC123786.2-201ENST00000603459 275 ntBASIC3.83□□□□□ -1.8
LMO4P61968 AC107952.2-201ENST00000606048 486 ntBASIC3.83□□□□□ -1.8
LMO4P61968 BX649567.1-201ENST00000642071 1134 ntBASIC3.83□□□□□ -1.8
LMO4P61968 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC3.83□□□□□ -1.8
LMO4P61968 AC099786.3-201ENST00000565735 1410 ntBASIC3.83□□□□□ -1.8
LMO4P61968 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
LMO4P61968 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LMO4P61968 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LMO4P61968 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
LMO4P61968 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC3.83□□□□□ -1.8
LMO4P61968 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 Z95331.1-201ENST00000623075 23112 ntBASIC3.83□□□□□ -1.8
LMO4P61968 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LMO4P61968 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.83□□□□□ -1.8
LMO4P61968 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LMO4P61968 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC3.83□□□□□ -1.8
LMO4P61968 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
LMO4P61968 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LMO4P61968 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LMO4P61968 AC011755.1-201ENST00000623763 2049 ntBASIC3.82□□□□□ -1.8
LMO4P61968 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 AC090017.1-201ENST00000548612 1779 ntBASIC3.82□□□□□ -1.8
LMO4P61968 HSPD1P11-201ENST00000508643 1702 ntBASIC3.82□□□□□ -1.8
LMO4P61968 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 AC135352.1-201ENST00000506173 1418 ntBASIC3.82□□□□□ -1.8
LMO4P61968 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 AC008549.2-201ENST00000333482 706 ntBASIC3.82□□□□□ -1.8
LMO4P61968 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LMO4P61968 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 RNU6-178P-201ENST00000384631 104 ntBASIC3.82□□□□□ -1.8
LMO4P61968 MIR659-201ENST00000384963 97 ntBASIC3.82□□□□□ -1.8
LMO4P61968 RNU6-796P-201ENST00000391086 107 ntBASIC3.82□□□□□ -1.8
LMO4P61968 HMGB1P10-201ENST00000395823 563 ntBASIC3.82□□□□□ -1.8
LMO4P61968 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 SDHCP2-201ENST00000398565 501 ntBASIC3.82□□□□□ -1.8
LMO4P61968 EI24P3-201ENST00000399046 1062 ntBASIC3.82□□□□□ -1.8
LMO4P61968 RPL23AP59-201ENST00000399415 461 ntBASIC3.82□□□□□ -1.8
LMO4P61968 TATDN1P1-201ENST00000414123 891 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO4P61968 TMBIM7P-201ENST00000418074 855 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AL590609.2-201ENST00000421430 368 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC099336.2-201ENST00000422457 254 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO4P61968 RPL7AP25-201ENST00000423357 805 ntBASIC3.82□□□□□ -1.8
LMO4P61968 USP9YP11-201ENST00000427537 717 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC093422.3-201ENST00000428506 305 ntBASIC3.82□□□□□ -1.8
LMO4P61968 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 MTCO1P52-201ENST00000433928 531 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO4P61968 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC092013.1-201ENST00000438795 332 ntBASIC3.82□□□□□ -1.8
LMO4P61968 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.82□□□□□ -1.8
LMO4P61968 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.82□□□□□ -1.8
LMO4P61968 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO4P61968 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LMO4P61968 AC099560.2-201ENST00000457554 255 ntBASIC3.82□□□□□ -1.8
LMO4P61968 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC3.82□□□□□ -1.8
LMO4P61968 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 AC098799.3-201ENST00000506095 438 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC093840.1-201ENST00000511599 336 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO4P61968 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.82□□□□□ -1.8
LMO4P61968 AC138832.1-201ENST00000522871 556 ntBASIC3.82□□□□□ -1.8
LMO4P61968 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.82□□□□□ -1.8
LMO4P61968 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.82□□□□□ -1.8
LMO4P61968 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 ZNF321P-202ENST00000550843 495 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO4P61968 MTCYBP33-201ENST00000575007 1130 ntBASIC3.82□□□□□ -1.8
LMO4P61968 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO4P61968 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.82□□□□□ -1.8
LMO4P61968 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 AL590392.1-201ENST00000604960 446 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 AC096586.1-201ENST00000610267 561 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC012409.3-201ENST00000611343 981 ntBASIC3.82□□□□□ -1.8
LMO4P61968 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.82□□□□□ -1.8
LMO4P61968 MLECP1-201ENST00000615893 709 ntBASIC3.82□□□□□ -1.8
LMO4P61968 AC006338.2-201ENST00000616864 791 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms