Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.98□□□□□ -1.61
CLRN1P58418 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLRN1P58418 AC095031.1-201ENST00000623685 672 ntBASIC4.98□□□□□ -1.61
CLRN1P58418 AC231657.1-201ENST00000624313 397 ntBASIC4.98□□□□□ -1.61
CLRN1P58418 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.98□□□□□ -1.61
CLRN1P58418 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLRN1P58418 HSPA8P17-201ENST00000427029 1382 ntBASIC4.98□□□□□ -1.61
CLRN1P58418 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLRN1P58418 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLRN1P58418 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLRN1P58418 AC009962.1-201ENST00000567327 3813 ntBASIC4.98□□□□□ -1.61
CLRN1P58418 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLRN1P58418 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
CLRN1P58418 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLRN1P58418 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CLRN1P58418 AP001284.1-201ENST00000528393 2118 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.97□□□□□ -1.61
CLRN1P58418 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLRN1P58418 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLRN1P58418 AC090017.1-201ENST00000548612 1779 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 RNA5SP394-201ENST00000364216 119 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 MIR506-201ENST00000384998 124 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CLRN1P58418 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLRN1P58418 RNU2-65P-201ENST00000410162 185 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC007394.1-201ENST00000421941 531 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CLRN1P58418 AC113412.1-201ENST00000425840 504 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC104843.2-201ENST00000427666 297 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 PPIAP13-201ENST00000434706 478 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 EEF1E1P1-201ENST00000446998 430 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC239367.2-201ENST00000447309 705 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 NANOGNBP1-201ENST00000448444 480 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 RPS23P9-201ENST00000448848 438 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC093392.2-201ENST00000450682 337 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.97□□□□□ -1.61
CLRN1P58418 AP000797.1-201ENST00000478870 387 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC013828.1-201ENST00000481845 158 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC138853.1-201ENST00000503549 823 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.97□□□□□ -1.61
CLRN1P58418 RN7SKP298-201ENST00000515950 94 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 RNU6-202P-201ENST00000515998 96 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 CYCSP22-201ENST00000517555 339 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 AP002453.2-201ENST00000533503 320 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.97□□□□□ -1.61
CLRN1P58418 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 SEPT7P9-203ENST00000604116 343 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC027807.2-201ENST00000616099 408 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC125336.1-201ENST00000508893 2827 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.97□□□□□ -1.61
CLRN1P58418 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 AC022031.1-201ENST00000585985 2593 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 MTCO1P7-201ENST00000419523 1542 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLRN1P58418 CYP1D1P-201ENST00000416662 1433 ntBASIC4.97□□□□□ -1.61
CLRN1P58418 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CLRN1P58418 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
CLRN1P58418 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CLRN1P58418 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
CLRN1P58418 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CLRN1P58418 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.96□□□□□ -1.61
CLRN1P58418 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.96□□□□□ -1.61
CLRN1P58418 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLRN1P58418 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
CLRN1P58418 AC016716.1-201ENST00000265882 708 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLRN1P58418 RNU6-462P-201ENST00000362659 105 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 RNU6-251P-201ENST00000363235 104 ntBASIC4.96□□□□□ -1.62
CLRN1P58418 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms