Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
GTF2A1P52655 AC010200.2-201ENST00000605098 235 ntBASIC3.9□□□□□ -1.79
GTF2A1P52655 AC009318.3-201ENST00000616916 503 ntBASIC3.9□□□□□ -1.79
GTF2A1P52655 AC016542.2-201ENST00000624201 619 ntBASIC3.9□□□□□ -1.79
GTF2A1P52655 AC091905.1-201ENST00000624400 311 ntBASIC3.9□□□□□ -1.79
GTF2A1P52655 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.9□□□□□ -1.79
GTF2A1P52655 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
GTF2A1P52655 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.89□□□□□ -1.79
GTF2A1P52655 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
GTF2A1P52655 AL590240.1-201ENST00000334118 313 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.89□□□□□ -1.79
GTF2A1P52655 RNA5SP305-201ENST00000362665 119 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 SNORA71.2-201ENST00000364941 134 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 MIR659-201ENST00000384963 97 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 MIR591-201ENST00000385290 95 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
GTF2A1P52655 RNA5SP113-201ENST00000410486 84 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 AC079355.1-201ENST00000421770 223 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 AL355433.1-201ENST00000422804 300 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 MTCO1P52-201ENST00000433928 531 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 AL049745.1-201ENST00000433953 286 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.89□□□□□ -1.79
GTF2A1P52655 AC009969.1-201ENST00000438726 172 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 AC018638.3-201ENST00000461273 132 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 AC063943.1-201ENST00000465434 453 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.89□□□□□ -1.79
GTF2A1P52655 AC106872.4-201ENST00000510050 523 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
GTF2A1P52655 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.89□□□□□ -1.79
GTF2A1P52655 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.89□□□□□ -1.79
GTF2A1P52655 OR4H12P-201ENST00000556269 907 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.89□□□□□ -1.79
GTF2A1P52655 AC007225.2-201ENST00000562529 256 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.89□□□□□ -1.79
GTF2A1P52655 AC022467.1-201ENST00000614738 749 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 CASC19-284ENST00000642142 1868 ntBASIC3.89□□□□□ -1.79
GTF2A1P52655 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
GTF2A1P52655 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.88□□□□□ -1.79
GTF2A1P52655 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GTF2A1P52655 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
GTF2A1P52655 FAR2P2-201ENST00000413041 594 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.88□□□□□ -1.79
GTF2A1P52655 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.88□□□□□ -1.79
GTF2A1P52655 AL139095.3-201ENST00000419672 1203 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 FAR2P4-202ENST00000425399 584 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AP001324.1-201ENST00000428553 399 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AC073069.1-201ENST00000428657 441 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.88□□□□□ -1.79
GTF2A1P52655 MTND2P2-201ENST00000434633 945 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 FTH1P1-201ENST00000437933 532 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.88□□□□□ -1.79
GTF2A1P52655 VN1R96P-201ENST00000446052 858 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.88□□□□□ -1.79
GTF2A1P52655 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.88□□□□□ -1.79
GTF2A1P52655 RPL7P5-201ENST00000471472 736 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 RPSAP50-201ENST00000481955 852 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.88□□□□□ -1.79
GTF2A1P52655 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.88□□□□□ -1.79
GTF2A1P52655 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.88□□□□□ -1.79
GTF2A1P52655 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
GTF2A1P52655 AC005000.1-201ENST00000536192 288 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
GTF2A1P52655 OR4T1P-201ENST00000554933 911 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.88□□□□□ -1.79
GTF2A1P52655 TGIF1P1-201ENST00000558095 802 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AC009117.1-201ENST00000563948 554 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 BGLT3-201ENST00000564523 994 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.88□□□□□ -1.79
GTF2A1P52655 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.88□□□□□ -1.79
GTF2A1P52655 AL161729.3-201ENST00000603533 673 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AL133338.2-201ENST00000604292 736 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 AL365400.2-201ENST00000605604 902 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 PLCE1P1-201ENST00000622094 305 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.88□□□□□ -1.79
GTF2A1P52655 MIR4278-201ENST00000636094 69 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 LINC01808-202ENST00000641680 1116 ntBASIC3.88□□□□□ -1.79
GTF2A1P52655 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GTF2A1P52655 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
GTF2A1P52655 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
GTF2A1P52655 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
GTF2A1P52655 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
GTF2A1P52655 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
GTF2A1P52655 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.87□□□□□ -1.79
GTF2A1P52655 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.87□□□□□ -1.79
GTF2A1P52655 AC125257.1-201ENST00000560400 2930 ntBASIC3.87□□□□□ -1.79
GTF2A1P52655 OR4A15-201ENST00000314706 1035 ntBASIC3.87□□□□□ -1.79
GTF2A1P52655 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
GTF2A1P52655 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
GTF2A1P52655 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms