Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM23P36406 AC096656.1-201ENST00000623826 1364 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 AC092435.4-201ENST00000623012 4159 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM23P36406 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM23P36406 AC007529.1-201ENST00000418574 2178 ntBASIC4.36□□□□□ -1.71
TRIM23P36406 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM23P36406 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRIM23P36406 HSPD1P14-201ENST00000432666 1618 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM23P36406 RNA5SP307-201ENST00000362863 116 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
TRIM23P36406 SNORA74C-2-201ENST00000411179 201 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 RPL21P108-201ENST00000413857 481 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AL160175.1-201ENST00000428124 247 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 RPL23AP25-201ENST00000430973 463 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AL132765.1-201ENST00000434165 553 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM23P36406 AC006326.1-201ENST00000445465 787 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM23P36406 VN1R32P-201ENST00000452234 905 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 RPL7P48-201ENST00000461513 746 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AC109327.1-201ENST00000471666 403 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 MTCO1P31-201ENST00000506355 492 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM23P36406 AC103833.1-201ENST00000517442 172 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM23P36406 TRAV8-5-201ENST00000537369 341 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM23P36406 RFPL1S-203ENST00000539579 330 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM23P36406 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM23P36406 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM23P36406 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM23P36406 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM23P36406 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM23P36406 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.35□□□□□ -1.71
TRIM23P36406 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.35□□□□□ -1.71
TRIM23P36406 AC068790.5-201ENST00000602741 355 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AC103792.1-201ENST00000603591 919 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AC090525.3-201ENST00000605601 189 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AC026979.4-201ENST00000606555 645 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AC004775.1-201ENST00000607389 753 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM23P36406 AC016957.2-201ENST00000616998 848 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM23P36406 AP000843.1-201ENST00000624880 701 ntBASIC4.35□□□□□ -1.71
TRIM23P36406 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.35□□□□□ -1.71
TRIM23P36406 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM23P36406 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TRIM23P36406 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.35□□□□□ -1.71
TRIM23P36406 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TRIM23P36406 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TRIM23P36406 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM23P36406 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM23P36406 RNU1-132P-201ENST00000364300 164 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM23P36406 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM23P36406 RNU6-185P-201ENST00000384421 107 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 FABP12P1-201ENST00000401911 322 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AL049693.1-201ENST00000402760 611 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM23P36406 RNU4-74P-201ENST00000411280 161 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 VDAC1P9-201ENST00000412766 841 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM23P36406 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM23P36406 CDY14P-201ENST00000431260 1014 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM23P36406 CDY12P-201ENST00000440679 1015 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 CDY13P-201ENST00000445813 1015 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 CDY23P-201ENST00000451661 1014 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM23P36406 DDX39BP2-208ENST00000453923 258 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM23P36406 AC107398.1-201ENST00000486904 505 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM23P36406 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.34□□□□□ -1.71
TRIM23P36406 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM23P36406 PRELID3BP5-201ENST00000508612 460 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 ATP1B1P1-201ENST00000509767 915 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRIM23P36406 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM23P36406 SMARCE1P4-201ENST00000523647 241 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 NOP56P3-201ENST00000549457 385 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.34□□□□□ -1.71
TRIM23P36406 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.34□□□□□ -1.71
TRIM23P36406 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TRIM23P36406 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM23P36406 AC023575.1-201ENST00000580510 358 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 MIR3939-201ENST00000582614 106 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 KATNBL1P5-201ENST00000605015 517 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AC135178.6-201ENST00000605314 398 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AC110792.4-201ENST00000609843 298 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 uc_338.32-201ENST00000615087 172 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.34□□□□□ -1.71
TRIM23P36406 AL445567.2-201ENST00000618935 498 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AC005086.4-201ENST00000623065 213 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 AC140479.6-201ENST00000633535 357 ntBASIC4.34□□□□□ -1.71
TRIM23P36406 OR52H1-202ENST00000641796 1061 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms