Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN7P35236 AC060788.1-201ENST00000521318 469 ntBASIC5.33□□□□□ -1.56
PTPN7P35236 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN7P35236 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN7P35236 RPL23AP53-201ENST00000521854 457 ntBASIC5.33□□□□□ -1.56
PTPN7P35236 PTS-202ENST00000524931 696 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN7P35236 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN7P35236 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPN7P35236 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN7P35236 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN7P35236 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN7P35236 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPN7P35236 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN7P35236 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPN7P35236 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPN7P35236 CYP4F35P-202ENST00000636121 390 ntBASIC5.33□□□□□ -1.56
PTPN7P35236 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN7P35236 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN7P35236 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN7P35236 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN7P35236 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN7P35236 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPN7P35236 AC011447.7-201ENST00000624228 1590 ntBASIC5.33□□□□□ -1.56
PTPN7P35236 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PTPN7P35236 AC133552.1-201ENST00000569988 4007 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN7P35236 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN7P35236 AC046144.1-201ENST00000478559 1853 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PTPN7P35236 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN7P35236 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PTPN7P35236 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTPN7P35236 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN7P35236 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PTPN7P35236 RNU5D-1-201ENST00000363299 116 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 SNORA67-201ENST00000384423 137 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 HMGB3P7-201ENST00000400214 611 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 RNU2-42P-201ENST00000410697 113 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 PIGPP2-201ENST00000411569 458 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 RPL7P8-201ENST00000411964 730 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.32□□□□□ -1.56
PTPN7P35236 Z99497.1-201ENST00000421282 135 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN7P35236 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.32□□□□□ -1.56
PTPN7P35236 MTCYBP39-201ENST00000437562 491 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN7P35236 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN7P35236 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN7P35236 RN7SL184P-201ENST00000488308 297 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 IGBP1P5-201ENST00000507524 1000 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 GTF2F2P1-201ENST00000511083 675 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN7P35236 AC108471.1-201ENST00000513977 287 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN7P35236 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPN7P35236 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN7P35236 NDUFB4P11-201ENST00000560510 395 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC010546.1-201ENST00000569391 485 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 MIR3614-201ENST00000581261 86 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC090312.2-201ENST00000582687 378 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC107304.1-201ENST00000604229 296 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC133552.5-201ENST00000604266 540 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AL589674.2-201ENST00000604304 337 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AL139286.2-201ENST00000606838 396 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN7P35236 AC015914.2-201ENST00000618167 288 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC018926.3-201ENST00000618841 406 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC009509.4-201ENST00000619202 509 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AL590240.3-201ENST00000621416 943 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC016717.3-201ENST00000624730 554 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPN7P35236 ATE1-AS1-202ENST00000636460 506 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN7P35236 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN7P35236 AC020633.1-201ENST00000468439 2247 ntBASIC5.32□□□□□ -1.56
PTPN7P35236 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PTPN7P35236 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN7P35236 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPN7P35236 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPN7P35236 AC093536.2-201ENST00000565257 1406 ntBASIC5.31□□□□□ -1.56
PTPN7P35236 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.31□□□□□ -1.56
PTPN7P35236 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.31□□□□□ -1.56
PTPN7P35236 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.31□□□□□ -1.56
PTPN7P35236 AC235565.1-201ENST00000456962 1325 ntBASIC5.31□□□□□ -1.56
PTPN7P35236 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN7P35236 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN7P35236 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN7P35236 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PTPN7P35236 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN7P35236 U3.4-201ENST00000363352 213 ntBASIC5.31□□□□□ -1.56
PTPN7P35236 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTPN7P35236 SNORA2.3-201ENST00000383920 135 ntBASIC5.31□□□□□ -1.56
PTPN7P35236 RNU6-253P-201ENST00000384730 105 ntBASIC5.31□□□□□ -1.56
PTPN7P35236 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PTPN7P35236 RNU6-1300P-201ENST00000391046 108 ntBASIC5.31□□□□□ -1.56
PTPN7P35236 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.31□□□□□ -1.56
PTPN7P35236 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPN7P35236 AC108075.1-201ENST00000424692 529 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms