Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RPS6P12-201ENST00000432491 726 ntBASIC4.71□□□□□ -1.66
CTNNA1P35221 DDX39BP2-208ENST00000453923 258 ntBASIC4.71□□□□□ -1.66
CTNNA1P35221 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.71□□□□□ -1.66
CTNNA1P35221 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.71□□□□□ -1.66
CTNNA1P35221 COL6A4P2-205ENST00000509855 506 ntBASIC4.71□□□□□ -1.66
CTNNA1P35221 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.71□□□□□ -1.66
CTNNA1P35221 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.71□□□□□ -1.66
CTNNA1P35221 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.71□□□□□ -1.66
CTNNA1P35221 RNU6-1102P-201ENST00000516149 96 ntBASIC4.71□□□□□ -1.66
CTNNA1P35221 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.71□□□□□ -1.66
CTNNA1P35221 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.71□□□□□ -1.66
CTNNA1P35221 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.71□□□□□ -1.66
CTNNA1P35221 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTNNA1P35221 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.71□□□□□ -1.66
CTNNA1P35221 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.71□□□□□ -1.66
CTNNA1P35221 AC018926.3-201ENST00000618841 406 ntBASIC4.71□□□□□ -1.66
CTNNA1P35221 AL163051.2-201ENST00000618976 735 ntBASIC4.71□□□□□ -1.66
CTNNA1P35221 AC073569.3-201ENST00000619055 682 ntBASIC4.71□□□□□ -1.66
CTNNA1P35221 AP006248.3-201ENST00000623580 594 ntBASIC4.71□□□□□ -1.66
CTNNA1P35221 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTNNA1P35221 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CTNNA1P35221 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CTNNA1P35221 SDAD1P1-202ENST00000524156 2051 ntBASIC4.71□□□□□ -1.66
CTNNA1P35221 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTNNA1P35221 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTNNA1P35221 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.71□□□□□ -1.66
CTNNA1P35221 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.71□□□□□ -1.66
CTNNA1P35221 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CTNNA1P35221 ASNSP1-204ENST00000641977 1664 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CTNNA1P35221 MTCO1P14-201ENST00000441695 1559 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.7□□□□□ -1.66
CTNNA1P35221 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTNNA1P35221 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTNNA1P35221 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTNNA1P35221 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTNNA1P35221 RN7SKP269-201ENST00000365545 319 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTNNA1P35221 DNAJC19P6-201ENST00000401853 280 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AL121882.1-201ENST00000422893 417 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.7□□□□□ -1.66
CTNNA1P35221 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC126121.1-201ENST00000482313 553 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC025768.1-201ENST00000510057 267 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 AC006499.6-201ENST00000511169 607 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC087272.1-201ENST00000523624 533 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC104229.1-201ENST00000561364 255 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC124068.1-201ENST00000563131 678 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 ATP5F1P7-201ENST00000567330 760 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC008638.3-201ENST00000603341 463 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 RMST_10.1-201ENST00000616309 154 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC007546.2-201ENST00000623996 360 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 AP003400.6-201ENST00000624698 740 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.7□□□□□ -1.66
CTNNA1P35221 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTNNA1P35221 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CTNNA1P35221 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CTNNA1P35221 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.7□□□□□ -1.66
CTNNA1P35221 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTNNA1P35221 AC010928.1-201ENST00000592477 1447 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 NSRP1P1-201ENST00000444067 1693 ntBASIC4.7□□□□□ -1.66
CTNNA1P35221 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CTNNA1P35221 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
CTNNA1P35221 NMD3P1-201ENST00000439704 1488 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTNNA1P35221 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTNNA1P35221 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.69□□□□□ -1.66
CTNNA1P35221 NOL8P1-201ENST00000508336 3529 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CTNNA1P35221 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CTNNA1P35221 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTNNA1P35221 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CTNNA1P35221 RNU6-1339P-201ENST00000363574 91 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 RHOT1P2-201ENST00000366423 333 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CTNNA1P35221 SNORA51.12-201ENST00000384448 134 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 SNORA70E-201ENST00000384492 135 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 MIR93-201ENST00000385024 80 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.69□□□□□ -1.66
CTNNA1P35221 RNU2-21P-201ENST00000410368 188 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 RNA5SP104-201ENST00000410989 118 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.69□□□□□ -1.66
CTNNA1P35221 RPS15AP40-201ENST00000419621 391 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 RPS12P5-201ENST00000423449 371 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.69□□□□□ -1.66
CTNNA1P35221 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.69□□□□□ -1.66
CTNNA1P35221 HLA-N-201ENST00000437516 135 ntBASIC4.69□□□□□ -1.66
CTNNA1P35221 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.69□□□□□ -1.66
CTNNA1P35221 PPIAP3-201ENST00000450588 505 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms