Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.44□□□□□ -1.7
CASQ1P31415 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.44□□□□□ -1.7
CASQ1P31415 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.44□□□□□ -1.7
CASQ1P31415 AL031320.1-201ENST00000604177 357 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 RNA5SP108-201ENST00000605921 117 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.44□□□□□ -1.7
CASQ1P31415 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.44□□□□□ -1.7
CASQ1P31415 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.44□□□□□ -1.7
CASQ1P31415 CR392039.4-201ENST00000624968 501 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 AL590763.1-201ENST00000398297 1545 ntBASIC4.44□□□□□ -1.7
CASQ1P31415 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CASQ1P31415 SDAD1P1-202ENST00000524156 2051 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 RN7SKP149-201ENST00000363008 344 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.43□□□□□ -1.7
CASQ1P31415 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CASQ1P31415 MIR1282-201ENST00000408865 101 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 FAR2P2-201ENST00000413041 594 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 RPS7P5-201ENST00000441482 581 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.43□□□□□ -1.7
CASQ1P31415 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 AC008953.1-201ENST00000497334 318 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 FTH1P24-201ENST00000503502 462 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 RPL7L1P4-201ENST00000513004 707 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.43□□□□□ -1.7
CASQ1P31415 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.43□□□□□ -1.7
CASQ1P31415 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.43□□□□□ -1.7
CASQ1P31415 AC069366.1-201ENST00000583159 838 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.43□□□□□ -1.7
CASQ1P31415 AP003117.1-201ENST00000602771 554 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 MIR4278-201ENST00000636094 69 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CASQ1P31415 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CASQ1P31415 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CASQ1P31415 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.43□□□□□ -1.7
CASQ1P31415 NMD3P1-201ENST00000439704 1488 ntBASIC4.43□□□□□ -1.7
CASQ1P31415 ASNSP1-204ENST00000641977 1664 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CASQ1P31415 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CASQ1P31415 OR11H4-201ENST00000315409 1082 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CASQ1P31415 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CASQ1P31415 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.42□□□□□ -1.7
CASQ1P31415 MIR153-1-201ENST00000384914 90 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 AC004022.2-201ENST00000413824 193 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 RPL30P2-201ENST00000414021 291 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 RPL7AP25-201ENST00000423357 805 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CASQ1P31415 IFNNP1-201ENST00000429219 553 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 ZNF33CP-201ENST00000432492 2030 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CASQ1P31415 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.42□□□□□ -1.7
CASQ1P31415 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.42□□□□□ -1.7
CASQ1P31415 ACTR3P2-201ENST00000439585 1257 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 SERPINA7P1-201ENST00000443077 631 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.42□□□□□ -1.7
CASQ1P31415 HMGN2P21-201ENST00000447764 270 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 TPMTP4-201ENST00000450749 678 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.42□□□□□ -1.7
CASQ1P31415 RPSAP50-201ENST00000481955 852 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 UBE2CP3-201ENST00000502715 450 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 CDH12P2-201ENST00000504393 298 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.42□□□□□ -1.7
CASQ1P31415 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.42□□□□□ -1.7
CASQ1P31415 AC026726.1-201ENST00000512859 601 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CASQ1P31415 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.42□□□□□ -1.7
CASQ1P31415 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.42□□□□□ -1.7
CASQ1P31415 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.42□□□□□ -1.7
CASQ1P31415 AL354950.1-201ENST00000614150 568 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 MIR6861-201ENST00000618657 64 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 AC087385.3-201ENST00000620477 187 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CASQ1P31415 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CASQ1P31415 IPO8P1-201ENST00000455509 3109 ntBASIC4.42□□□□□ -1.7
CASQ1P31415 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CASQ1P31415 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.42□□□□□ -1.7
CASQ1P31415 AL353743.4-201ENST00000422653 1547 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASQ1P31415 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASQ1P31415 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.41□□□□□ -1.7
CASQ1P31415 MIR331-201ENST00000362302 94 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 SNORA51.8-201ENST00000384234 132 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AL583835.1-201ENST00000399570 407 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AL031736.2-201ENST00000426573 787 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.41□□□□□ -1.7
CASQ1P31415 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.41□□□□□ -1.7
CASQ1P31415 AL031663.1-201ENST00000437445 219 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AC110749.1-201ENST00000462007 357 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 RN7SL93P-201ENST00000463035 293 ntBASIC4.41□□□□□ -1.7
CASQ1P31415 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.41□□□□□ -1.7
CASQ1P31415 AC021146.1-201ENST00000511202 716 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms