Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC12P31275 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXC12P31275 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXC12P31275 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC12P31275 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
HOXC12P31275 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC12P31275 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC12P31275 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC12P31275 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HOXC12P31275 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC12P31275 FARSBP1-201ENST00000435808 1778 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 AC027575.3-201ENST00000583058 2747 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 PABPC1P8-201ENST00000452851 2086 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 RNU6-769P-201ENST00000384407 104 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 RNU6-441P-201ENST00000384545 106 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 RNU6-952P-201ENST00000391164 108 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AC087752.1-201ENST00000391360 558 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 MTCO3P40-201ENST00000392516 676 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 DSTNP4-201ENST00000399472 474 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 RNA5SP296-201ENST00000410523 111 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 MTCYBP24-201ENST00000420387 1106 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 COX6CP17-201ENST00000421389 185 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 HMGB1P31-201ENST00000437242 427 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 ARPC3P5-201ENST00000448802 534 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 PPIAP27-201ENST00000453800 265 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 OR4D12P-201ENST00000509361 911 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AC034159.1-201ENST00000513885 583 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 RN7SKP35-201ENST00000517210 151 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 AL121594.2-201ENST00000541658 472 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC12P31275 AC008127.2-201ENST00000549925 1075 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.53□□□□□ -1.52
HOXC12P31275 AC006504.3-201ENST00000586818 523 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AC067852.5-201ENST00000589299 310 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AC005332.4-201ENST00000592752 579 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 BCRP9-201ENST00000605312 388 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC12P31275 AC104458.1-201ENST00000608243 463 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AL008723.3-201ENST00000608926 449 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AC092681.3-201ENST00000609463 678 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AC009237.17-201ENST00000618111 748 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 AC006338.1-201ENST00000618453 749 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 AC011369.2-201ENST00000624423 1567 ntBASIC5.53□□□□□ -1.52
HOXC12P31275 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.53□□□□□ -1.52
HOXC12P31275 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.53□□□□□ -1.52
HOXC12P31275 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
HOXC12P31275 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HOXC12P31275 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC12P31275 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC12P31275 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HOXC12P31275 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HOXC12P31275 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC12P31275 AL022578.1-201ENST00000439330 1433 ntBASIC5.52□□□□□ -1.53
HOXC12P31275 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC12P31275 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.52□□□□□ -1.53
HOXC12P31275 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC12P31275 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
HOXC12P31275 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC12P31275 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC12P31275 RNU6-694P-201ENST00000364071 147 ntBASIC5.52□□□□□ -1.53
HOXC12P31275 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC12P31275 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.52□□□□□ -1.53
HOXC12P31275 AC004690.1-201ENST00000418216 328 ntBASIC5.52□□□□□ -1.53
HOXC12P31275 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.52□□□□□ -1.53
HOXC12P31275 AL445669.1-201ENST00000426743 755 ntBASIC5.52□□□□□ -1.53
HOXC12P31275 AL358934.1-201ENST00000432346 324 ntBASIC5.52□□□□□ -1.53
HOXC12P31275 AC023347.2-201ENST00000433994 462 ntBASIC5.52□□□□□ -1.53
HOXC12P31275 NPM1P18-201ENST00000434232 732 ntBASIC5.52□□□□□ -1.53
HOXC12P31275 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HOXC12P31275 TUBB4BP6-201ENST00000437576 479 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms