Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL4A5P29400 AC127537.2-201ENST00000439258 465 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 BTF3P5-201ENST00000457252 467 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 SNORD105B-201ENST00000458770 79 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AC025518.1-201ENST00000479856 347 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 RN7SL271P-201ENST00000487601 295 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 NPM1P28-201ENST00000492269 840 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 PRELID3BP6-201ENST00000503839 571 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 RNU2-27P-201ENST00000516185 142 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AC090136.1-201ENST00000520009 240 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.48□□□□□ -1.69
COL4A5P29400 AC103843.2-201ENST00000530523 682 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AC068020.1-201ENST00000594215 661 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 AL139089.1-201ENST00000620372 975 ntBASIC4.48□□□□□ -1.69
COL4A5P29400 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COL4A5P29400 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COL4A5P29400 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
COL4A5P29400 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A5P29400 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A5P29400 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A5P29400 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A5P29400 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A5P29400 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.47□□□□□ -1.69
COL4A5P29400 OSTCP5-201ENST00000425293 453 ntBASIC4.47□□□□□ -1.69
COL4A5P29400 AC010285.3-201ENST00000511668 676 ntBASIC4.47□□□□□ -1.69
COL4A5P29400 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.47□□□□□ -1.69
COL4A5P29400 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.47□□□□□ -1.69
COL4A5P29400 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.47□□□□□ -1.69
COL4A5P29400 AC010591.1-201ENST00000603941 649 ntBASIC4.47□□□□□ -1.69
COL4A5P29400 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
COL4A5P29400 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A5P29400 AP000641.1-201ENST00000531988 1639 ntBASIC4.47□□□□□ -1.69
COL4A5P29400 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.47□□□□□ -1.69
COL4A5P29400 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A5P29400 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
COL4A5P29400 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
COL4A5P29400 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
COL4A5P29400 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A5P29400 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A5P29400 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A5P29400 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.46□□□□□ -1.7
COL4A5P29400 MIR1289-1-201ENST00000408836 144 ntBASIC4.46□□□□□ -1.7
COL4A5P29400 MAPRE1P3-201ENST00000435438 796 ntBASIC4.46□□□□□ -1.7
COL4A5P29400 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.46□□□□□ -1.7
COL4A5P29400 RPL21P10-201ENST00000463521 490 ntBASIC4.46□□□□□ -1.7
COL4A5P29400 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.46□□□□□ -1.7
COL4A5P29400 RN7SKP46-201ENST00000515942 234 ntBASIC4.46□□□□□ -1.7
COL4A5P29400 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A5P29400 MIR4472-2-201ENST00000582069 67 ntBASIC4.46□□□□□ -1.7
COL4A5P29400 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.46□□□□□ -1.7
COL4A5P29400 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.46□□□□□ -1.7
COL4A5P29400 AC125494.3-201ENST00000602759 455 ntBASIC4.46□□□□□ -1.7
COL4A5P29400 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.46□□□□□ -1.7
COL4A5P29400 AC026979.4-201ENST00000606555 645 ntBASIC4.46□□□□□ -1.7
COL4A5P29400 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.46□□□□□ -1.7
COL4A5P29400 AP000553.6-201ENST00000641242 118 ntBASIC4.46□□□□□ -1.7
COL4A5P29400 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
COL4A5P29400 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A5P29400 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A5P29400 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.46□□□□□ -1.7
COL4A5P29400 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A5P29400 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
COL4A5P29400 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.46□□□□□ -1.7
COL4A5P29400 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A5P29400 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.46□□□□□ -1.7
COL4A5P29400 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
COL4A5P29400 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A5P29400 BMS1P3-201ENST00000372011 932 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A5P29400 AC234772.1-201ENST00000377927 937 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.45□□□□□ -1.7
COL4A5P29400 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.45□□□□□ -1.7
COL4A5P29400 AC245054.1-201ENST00000420944 258 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 RPL7P44-201ENST00000424827 742 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 BX119904.3-201ENST00000428194 957 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 AC005019.1-201ENST00000436455 431 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.45□□□□□ -1.7
COL4A5P29400 UBE2DNL-203ENST00000474922 222 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 RPL7P23-201ENST00000493874 747 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 USP9YP2-201ENST00000504503 1000 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A5P29400 USP9YP1-201ENST00000513521 1002 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A5P29400 GNRHR2P1-201ENST00000555315 631 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A5P29400 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A5P29400 MIR4513-201ENST00000581077 86 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.45□□□□□ -1.7
COL4A5P29400 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A5P29400 ATE1-AS1-202ENST00000636460 506 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A5P29400 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL4A5P29400 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A5P29400 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC4.45□□□□□ -1.7
COL4A5P29400 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A5P29400 AC010300.1-201ENST00000600671 5134 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL4A5P29400 AP001642.1-201ENST00000624727 2117 ntBASIC4.45□□□□□ -1.7
COL4A5P29400 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COL4A5P29400 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms