Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGA1P17096 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGA1P17096 CASC19-284ENST00000642142 1868 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGA1P17096 SNORA70.4-201ENST00000365509 134 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGA1P17096 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGA1P17096 OR6C64P-201ENST00000419708 825 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 AC006946.1-201ENST00000429106 328 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 TPTE2P3-201ENST00000441562 1189 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 SETD6P1-201ENST00000444575 317 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 PDSS1P2-201ENST00000449397 678 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGA1P17096 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGA1P17096 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGA1P17096 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGA1P17096 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGA1P17096 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGA1P17096 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HMGA1P17096 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.93□□□□□ -1.78
HMGA1P17096 AC106707.2-201ENST00000484182 374 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.93□□□□□ -1.78
HMGA1P17096 HMGN1P11-201ENST00000508668 303 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 AC026726.1-201ENST00000512859 601 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGA1P17096 HMGN1P15-201ENST00000513870 295 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGA1P17096 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGA1P17096 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGA1P17096 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HMGA1P17096 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.93□□□□□ -1.78
HMGA1P17096 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.93□□□□□ -1.78
HMGA1P17096 MIR3922-201ENST00000585192 84 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.93□□□□□ -1.78
HMGA1P17096 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.93□□□□□ -1.78
HMGA1P17096 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HMGA1P17096 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HMGA1P17096 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HMGA1P17096 AC093849.1-201ENST00000563631 2209 ntBASIC3.93□□□□□ -1.78
HMGA1P17096 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.92□□□□□ -1.78
HMGA1P17096 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGA1P17096 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGA1P17096 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
HMGA1P17096 IPO8P1-201ENST00000455509 3109 ntBASIC3.92□□□□□ -1.78
HMGA1P17096 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGA1P17096 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGA1P17096 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HMGA1P17096 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HMGA1P17096 MIR93-201ENST00000385024 80 ntBASIC3.92□□□□□ -1.78
HMGA1P17096 ATP5F1P4-201ENST00000397288 746 ntBASIC3.92□□□□□ -1.78
HMGA1P17096 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HMGA1P17096 LAP3P1-201ENST00000403648 294 ntBASIC3.92□□□□□ -1.78
HMGA1P17096 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HMGA1P17096 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGA1P17096 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGA1P17096 HMGN2P31-201ENST00000432430 273 ntBASIC3.92□□□□□ -1.78
HMGA1P17096 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGA1P17096 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGA1P17096 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGA1P17096 APOOP2-201ENST00000461561 539 ntBASIC3.92□□□□□ -1.78
HMGA1P17096 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HMGA1P17096 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGA1P17096 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGA1P17096 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGA1P17096 OR1AB1P-201ENST00000585564 761 ntBASIC3.92□□□□□ -1.78
HMGA1P17096 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.92□□□□□ -1.78
HMGA1P17096 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.92□□□□□ -1.78
HMGA1P17096 AL137849.1-201ENST00000604767 169 ntBASIC3.92□□□□□ -1.78
HMGA1P17096 AC119674.1-207ENST00000641355 633 ntBASIC3.92□□□□□ -1.78
HMGA1P17096 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGA1P17096 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.92□□□□□ -1.78
HMGA1P17096 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.92□□□□□ -1.78
HMGA1P17096 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGA1P17096 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HMGA1P17096 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HMGA1P17096 BTBD10P1-201ENST00000549824 1352 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HMGA1P17096 SNORA63.1-201ENST00000362493 131 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 AL672167.2-201ENST00000377164 879 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HMGA1P17096 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGA1P17096 NPM1P38-201ENST00000403835 865 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGA1P17096 ATP5A1P2-201ENST00000412323 255 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.91□□□□□ -1.78
HMGA1P17096 ELOCP18-201ENST00000434209 337 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 AC096638.2-201ENST00000434965 711 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 HSPD1P21-201ENST00000436541 245 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGA1P17096 AC073587.1-201ENST00000447093 876 ntBASIC3.91□□□□□ -1.78
HMGA1P17096 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HMGA1P17096 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.91□□□□□ -1.78
HMGA1P17096 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.91□□□□□ -1.78
HMGA1P17096 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms