Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC9.12□□□□□ -0.95
CHGAP10645 AL049780.3-201ENST00000624612 1583 ntBASIC9.12□□□□□ -0.95
CHGAP10645 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
CHGAP10645 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHGAP10645 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CHGAP10645 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHGAP10645 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC9.11□□□□□ -0.95
CHGAP10645 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
CHGAP10645 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC9.11□□□□□ -0.95
CHGAP10645 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CHGAP10645 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC9.11□□□□□ -0.95
CHGAP10645 CYP2G2P-201ENST00000594920 1485 ntBASIC9.11□□□□□ -0.95
CHGAP10645 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
CHGAP10645 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC9.11□□□□□ -0.95
CHGAP10645 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHGAP10645 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CHGAP10645 SNORA21-201ENST00000362423 132 ntBASIC9.11□□□□□ -0.95
CHGAP10645 RN7SKP6-201ENST00000364795 319 ntBASIC9.11□□□□□ -0.95
CHGAP10645 RNU6-169P-201ENST00000365336 107 ntBASIC9.11□□□□□ -0.95
CHGAP10645 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHGAP10645 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CHGAP10645 U3.23-201ENST00000391132 200 ntBASIC9.11□□□□□ -0.95
CHGAP10645 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC9.11□□□□□ -0.95
CHGAP10645 ZSCAN12P1-201ENST00000406489 419 ntBASIC9.11□□□□□ -0.95
CHGAP10645 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC9.11□□□□□ -0.95
CHGAP10645 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC9.11□□□□□ -0.95
CHGAP10645 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC9.11□□□□□ -0.95
CHGAP10645 AL161636.2-201ENST00000445179 927 ntBASIC9.11□□□□□ -0.95
CHGAP10645 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC9.11□□□□□ -0.95
CHGAP10645 AC002553.3-201ENST00000453002 341 ntBASIC9.11□□□□□ -0.95
CHGAP10645 RPS4XP18-201ENST00000495480 763 ntBASIC9.11□□□□□ -0.95
CHGAP10645 EIF4EP3-201ENST00000498782 656 ntBASIC9.11□□□□□ -0.95
CHGAP10645 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC9.11□□□□□ -0.95
CHGAP10645 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC9.11□□□□□ -0.95
CHGAP10645 RNU6-202P-201ENST00000515998 96 ntBASIC9.11□□□□□ -0.95
CHGAP10645 Y_RNA.711-201ENST00000516993 102 ntBASIC9.11□□□□□ -0.95
CHGAP10645 LECT2-205ENST00000522943 574 ntTSL 3 BASIC9.11□□□□□ -0.95
CHGAP10645 AP003396.4-201ENST00000527574 265 ntBASIC9.11□□□□□ -0.95
CHGAP10645 OR4R1P-201ENST00000529879 463 ntBASIC9.11□□□□□ -0.95
CHGAP10645 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CHGAP10645 OTX2-203ENST00000554559 715 ntTSL 5 BASIC9.11□□□□□ -0.95
CHGAP10645 MIR3118-1-201ENST00000581787 76 ntBASIC9.11□□□□□ -0.95
CHGAP10645 MAGOH2P-202ENST00000584384 429 ntBASIC9.11□□□□□ -0.95
CHGAP10645 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC9.11□□□□□ -0.95
CHGAP10645 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC9.11□□□□□ -0.95
CHGAP10645 AC008555.7-201ENST00000605008 583 ntBASIC9.11□□□□□ -0.95
CHGAP10645 OR1N1-202ENST00000619659 939 ntBASIC9.11□□□□□ -0.95
CHGAP10645 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC9.11□□□□□ -0.95
CHGAP10645 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC9.11□□□□□ -0.95
CHGAP10645 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CHGAP10645 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
CHGAP10645 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC9.11□□□□□ -0.95
CHGAP10645 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC9.11□□□□□ -0.95
CHGAP10645 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CHGAP10645 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
CHGAP10645 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC9.11□□□□□ -0.95
CHGAP10645 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC9.1□□□□□ -0.95
CHGAP10645 KLHL32-207ENST00000620278 2642 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC9.1□□□□□ -0.95
CHGAP10645 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 AC096921.2-201ENST00000561507 1916 ntBASIC9.1□□□□□ -0.95
CHGAP10645 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 Y_RNA.146-201ENST00000363549 102 ntBASIC9.1□□□□□ -0.95
CHGAP10645 RPL5P18-201ENST00000406671 891 ntBASIC9.1□□□□□ -0.95
CHGAP10645 NPM1P40-201ENST00000412758 733 ntBASIC9.1□□□□□ -0.95
CHGAP10645 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC9.1□□□□□ -0.95
CHGAP10645 AC119618.1-201ENST00000434191 222 ntBASIC9.1□□□□□ -0.95
CHGAP10645 RPS26P40-201ENST00000435209 294 ntBASIC9.1□□□□□ -0.95
CHGAP10645 IGKV1OR10-1-201ENST00000442306 329 ntBASIC9.1□□□□□ -0.95
CHGAP10645 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC9.1□□□□□ -0.95
CHGAP10645 AL022237.1-201ENST00000446663 358 ntBASIC9.1□□□□□ -0.95
CHGAP10645 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC9.1□□□□□ -0.95
CHGAP10645 IGKV1OR22-5-201ENST00000458718 354 ntBASIC9.1□□□□□ -0.95
CHGAP10645 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC9.1□□□□□ -0.95
CHGAP10645 MTCO2P29-201ENST00000465212 189 ntBASIC9.1□□□□□ -0.95
CHGAP10645 AC233702.1-201ENST00000482905 502 ntBASIC9.1□□□□□ -0.95
CHGAP10645 AC104986.1-201ENST00000517978 436 ntBASIC9.1□□□□□ -0.95
CHGAP10645 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC9.1□□□□□ -0.95
CHGAP10645 BNIP3P6-201ENST00000549284 499 ntBASIC9.1□□□□□ -0.95
CHGAP10645 AC092121.1-201ENST00000569452 202 ntBASIC9.1□□□□□ -0.95
CHGAP10645 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC9.1□□□□□ -0.95
CHGAP10645 AC006006.1-201ENST00000603082 144 ntBASIC9.1□□□□□ -0.95
CHGAP10645 AC087763.1-201ENST00000603391 286 ntBASIC9.1□□□□□ -0.95
CHGAP10645 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC9.1□□□□□ -0.95
CHGAP10645 AC245014.3-201ENST00000618589 347 ntBASIC9.1□□□□□ -0.95
CHGAP10645 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC9.1□□□□□ -0.95
CHGAP10645 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC9.1□□□□□ -0.95
CHGAP10645 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CHGAP10645 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms