Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC009965.2-201ENST00000425328 970 ntBASIC4.46□□□□□ -1.7
TPM1P09493 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.46□□□□□ -1.7
TPM1P09493 AL360081.1-201ENST00000428299 555 ntBASIC4.46□□□□□ -1.7
TPM1P09493 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.46□□□□□ -1.7
TPM1P09493 PTMAP6-201ENST00000439110 327 ntBASIC4.46□□□□□ -1.7
TPM1P09493 AC009263.1-201ENST00000441193 1239 ntBASIC4.46□□□□□ -1.7
TPM1P09493 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.46□□□□□ -1.7
TPM1P09493 USP9YP5-201ENST00000511770 630 ntBASIC4.46□□□□□ -1.7
TPM1P09493 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.46□□□□□ -1.7
TPM1P09493 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
TPM1P09493 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.46□□□□□ -1.7
TPM1P09493 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TPM1P09493 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.46□□□□□ -1.7
TPM1P09493 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.46□□□□□ -1.7
TPM1P09493 AC022655.2-201ENST00000577280 318 ntBASIC4.46□□□□□ -1.7
TPM1P09493 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
TPM1P09493 MIR4436B2-201ENST00000581415 91 ntBASIC4.46□□□□□ -1.7
TPM1P09493 MIR4436B1-201ENST00000583272 91 ntBASIC4.46□□□□□ -1.7
TPM1P09493 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.46□□□□□ -1.7
TPM1P09493 EIF1P6-201ENST00000600054 334 ntBASIC4.46□□□□□ -1.7
TPM1P09493 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.46□□□□□ -1.7
TPM1P09493 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.46□□□□□ -1.7
TPM1P09493 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TPM1P09493 AL158163.1-201ENST00000603915 1649 ntBASIC4.46□□□□□ -1.7
TPM1P09493 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TPM1P09493 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TPM1P09493 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.46□□□□□ -1.7
TPM1P09493 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
TPM1P09493 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TPM1P09493 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.45□□□□□ -1.7
TPM1P09493 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TPM1P09493 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.45□□□□□ -1.7
TPM1P09493 RNU6-1251P-201ENST00000364502 107 ntBASIC4.45□□□□□ -1.7
TPM1P09493 MIR105-2-201ENST00000385083 81 ntBASIC4.45□□□□□ -1.7
TPM1P09493 AC240504.1-201ENST00000395709 845 ntBASIC4.45□□□□□ -1.7
TPM1P09493 RN7SKP177-201ENST00000410567 355 ntBASIC4.45□□□□□ -1.7
TPM1P09493 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.45□□□□□ -1.7
TPM1P09493 MTND2P28-201ENST00000457540 1044 ntBASIC4.45□□□□□ -1.7
TPM1P09493 AC110749.1-201ENST00000462007 357 ntBASIC4.45□□□□□ -1.7
TPM1P09493 OR52A4P-201ENST00000472867 958 ntBASIC4.45□□□□□ -1.7
TPM1P09493 AC074386.1-201ENST00000476560 767 ntBASIC4.45□□□□□ -1.7
TPM1P09493 AP000926.1-201ENST00000479573 241 ntBASIC4.45□□□□□ -1.7
TPM1P09493 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.45□□□□□ -1.7
TPM1P09493 AC026726.1-201ENST00000512859 601 ntBASIC4.45□□□□□ -1.7
TPM1P09493 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.45□□□□□ -1.7
TPM1P09493 OR5D15P-201ENST00000531671 942 ntBASIC4.45□□□□□ -1.7
TPM1P09493 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.45□□□□□ -1.7
TPM1P09493 MIR4458-201ENST00000578872 75 ntBASIC4.45□□□□□ -1.7
TPM1P09493 FAM25E-202ENST00000608562 189 ntBASIC4.45□□□□□ -1.7
TPM1P09493 AL161616.1-201ENST00000611867 286 ntBASIC4.45□□□□□ -1.7
TPM1P09493 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.45□□□□□ -1.7
TPM1P09493 AL133370.2-201ENST00000619934 439 ntBASIC4.45□□□□□ -1.7
TPM1P09493 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.45□□□□□ -1.7
TPM1P09493 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TPM1P09493 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TPM1P09493 AL118496.1-201ENST00000440201 1812 ntBASIC4.44□□□□□ -1.7
TPM1P09493 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TPM1P09493 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TPM1P09493 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TPM1P09493 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.44□□□□□ -1.7
TPM1P09493 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.44□□□□□ -1.7
TPM1P09493 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TPM1P09493 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.44□□□□□ -1.7
TPM1P09493 RPEP3-201ENST00000425462 676 ntBASIC4.44□□□□□ -1.7
TPM1P09493 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.44□□□□□ -1.7
TPM1P09493 USP9YP9-201ENST00000429406 715 ntBASIC4.44□□□□□ -1.7
TPM1P09493 FTH1P6-201ENST00000430768 320 ntBASIC4.44□□□□□ -1.7
TPM1P09493 AL500522.2-201ENST00000448562 343 ntBASIC4.44□□□□□ -1.7
TPM1P09493 RPL7P1-201ENST00000468161 747 ntBASIC4.44□□□□□ -1.7
TPM1P09493 RPL7P9-201ENST00000468715 747 ntBASIC4.44□□□□□ -1.7
TPM1P09493 PPIAP15-201ENST00000479662 484 ntBASIC4.44□□□□□ -1.7
TPM1P09493 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.44□□□□□ -1.7
TPM1P09493 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.44□□□□□ -1.7
TPM1P09493 RNA5SP49-201ENST00000516450 115 ntBASIC4.44□□□□□ -1.7
TPM1P09493 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.44□□□□□ -1.7
TPM1P09493 TVP23BP1-201ENST00000557500 617 ntBASIC4.44□□□□□ -1.7
TPM1P09493 AL049844.2-201ENST00000604280 628 ntBASIC4.44□□□□□ -1.7
TPM1P09493 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.44□□□□□ -1.7
TPM1P09493 MIR6780A-201ENST00000615089 68 ntBASIC4.44□□□□□ -1.7
TPM1P09493 U7.8-201ENST00000619968 63 ntBASIC4.44□□□□□ -1.7
TPM1P09493 AP003497.2-201ENST00000624220 967 ntBASIC4.44□□□□□ -1.7
TPM1P09493 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TPM1P09493 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TPM1P09493 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.44□□□□□ -1.7
TPM1P09493 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TPM1P09493 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TPM1P09493 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TPM1P09493 SNORA60-201ENST00000362396 134 ntBASIC4.43□□□□□ -1.7
TPM1P09493 MIR129-1-201ENST00000384972 72 ntBASIC4.43□□□□□ -1.7
TPM1P09493 RPL23AP59-201ENST00000399415 461 ntBASIC4.43□□□□□ -1.7
TPM1P09493 RPS3AP23-201ENST00000401762 784 ntBASIC4.43□□□□□ -1.7
TPM1P09493 RNU4-25P-201ENST00000410569 230 ntBASIC4.43□□□□□ -1.7
TPM1P09493 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.43□□□□□ -1.7
TPM1P09493 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.43□□□□□ -1.7
TPM1P09493 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.43□□□□□ -1.7
TPM1P09493 KCTD9P3-201ENST00000434597 1169 ntBASIC4.43□□□□□ -1.7
TPM1P09493 MTCYBP29-201ENST00000436327 1006 ntBASIC4.43□□□□□ -1.7
TPM1P09493 RPL12P3-201ENST00000440080 396 ntBASIC4.43□□□□□ -1.7
TPM1P09493 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.43□□□□□ -1.7
TPM1P09493 AC073264.2-201ENST00000448886 166 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms