Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFAP04085 AC107934.1-201ENST00000522215 217 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 OR5B19P-201ENST00000531766 928 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFAP04085 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC6.2□□□□□ -1.42
PDGFAP04085 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 AC053481.3-201ENST00000577881 843 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 MIR4502-201ENST00000580432 81 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC6.2□□□□□ -1.42
PDGFAP04085 AC027243.2-201ENST00000602530 724 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 AP000942.4-201ENST00000604811 241 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 AC105429.2-201ENST00000610567 517 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 AC093913.1-201ENST00000614178 329 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 AL355974.3-201ENST00000617383 467 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 AC005858.4-201ENST00000623191 700 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 CR381572.1-201ENST00000625098 102 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.2□□□□□ -1.42
PDGFAP04085 TPTEP1-208ENST00000636884 213 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFAP04085 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 PROS2P-201ENST00000474651 1951 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.2□□□□□ -1.42
PDGFAP04085 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
PDGFAP04085 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 AC006210.2-201ENST00000367074 1545 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 MTCO1P11-201ENST00000429111 1528 ntBASIC6.2□□□□□ -1.42
PDGFAP04085 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PDGFAP04085 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC009779.8-201ENST00000641684 4384 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
PDGFAP04085 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 Y_RNA.67-201ENST00000362870 100 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFAP04085 RNA5SP198-201ENST00000410376 127 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 RN7SKP140-201ENST00000411196 284 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 RPS7P8-201ENST00000418311 581 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 MTND6P18-201ENST00000439477 513 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 RPL5P25-201ENST00000441148 775 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AC079781.2-201ENST00000446424 169 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AC104651.2-201ENST00000447549 528 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AC005297.2-201ENST00000450430 606 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 HMGB1P15-201ENST00000453854 435 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 RN7SL552P-201ENST00000462094 276 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 RPS3AP50-201ENST00000487064 803 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 RPL23AP72-201ENST00000492447 435 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 RN7SL187P-201ENST00000495587 303 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AC108693.1-201ENST00000496068 432 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFAP04085 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFAP04085 RNU6-347P-201ENST00000516658 105 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC087241.2-201ENST00000535801 324 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.19□□□□□ -1.42
PDGFAP04085 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 AC005668.1-201ENST00000571142 476 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PDGFAP04085 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.19□□□□□ -1.42
PDGFAP04085 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 RPL23AP92-201ENST00000603609 255 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AC114477.1-201ENST00000605097 605 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 AC022400.9-201ENST00000623633 273 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 CYP3A51P-201ENST00000633513 256 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 AC011933.2-201ENST00000578539 2790 ntBASIC6.19□□□□□ -1.42
PDGFAP04085 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
PDGFAP04085 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.19□□□□□ -1.42
PDGFAP04085 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms