Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.66□□□□□ -1.66
COL1A1P02452 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
COL1A1P02452 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.65□□□□□ -1.66
COL1A1P02452 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL1A1P02452 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL1A1P02452 RN7SKP177-201ENST00000410567 355 ntBASIC4.65□□□□□ -1.66
COL1A1P02452 RPS29P4-201ENST00000414733 161 ntBASIC4.65□□□□□ -1.66
COL1A1P02452 MTND2P15-201ENST00000418575 892 ntBASIC4.65□□□□□ -1.66
COL1A1P02452 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.65□□□□□ -1.66
COL1A1P02452 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.65□□□□□ -1.66
COL1A1P02452 SEPT14P1-201ENST00000458703 648 ntBASIC4.65□□□□□ -1.66
COL1A1P02452 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.65□□□□□ -1.66
COL1A1P02452 UBTFL9-201ENST00000534504 1148 ntBASIC4.65□□□□□ -1.66
COL1A1P02452 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.65□□□□□ -1.66
COL1A1P02452 AC027807.1-201ENST00000559921 996 ntBASIC4.65□□□□□ -1.66
COL1A1P02452 AC022146.1-201ENST00000595307 847 ntBASIC4.65□□□□□ -1.66
COL1A1P02452 AC018690.1-201ENST00000608144 626 ntBASIC4.65□□□□□ -1.66
COL1A1P02452 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.65□□□□□ -1.66
COL1A1P02452 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
COL1A1P02452 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.65□□□□□ -1.67
COL1A1P02452 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL1A1P02452 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.65□□□□□ -1.67
COL1A1P02452 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL1A1P02452 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
COL1A1P02452 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
COL1A1P02452 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.65□□□□□ -1.67
COL1A1P02452 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
COL1A1P02452 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL1A1P02452 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.64□□□□□ -1.67
COL1A1P02452 AC058791.1-201ENST00000608412 3198 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL1A1P02452 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL1A1P02452 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.64□□□□□ -1.67
COL1A1P02452 RPS7P15-201ENST00000415804 584 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 GNG5P5-201ENST00000420444 220 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.64□□□□□ -1.67
COL1A1P02452 AC104978.1-201ENST00000449387 391 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.64□□□□□ -1.67
COL1A1P02452 RPL21P11-201ENST00000461458 483 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.64□□□□□ -1.67
COL1A1P02452 RN7SL271P-201ENST00000487601 295 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.64□□□□□ -1.67
COL1A1P02452 CDH12P2-201ENST00000504393 298 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 AC017037.1-201ENST00000508460 471 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 HMGN1P11-201ENST00000508668 303 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.64□□□□□ -1.67
COL1A1P02452 RN7SKP18-201ENST00000516005 275 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.64□□□□□ -1.67
COL1A1P02452 AC022695.1-201ENST00000522089 237 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.64□□□□□ -1.67
COL1A1P02452 GNRHR2P1-201ENST00000555315 631 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.64□□□□□ -1.67
COL1A1P02452 MTND5P1-201ENST00000445440 1375 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL1A1P02452 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.64□□□□□ -1.67
COL1A1P02452 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL1A1P02452 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL1A1P02452 AC083843.3-201ENST00000623679 2186 ntBASIC4.64□□□□□ -1.67
COL1A1P02452 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.64□□□□□ -1.67
COL1A1P02452 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.63□□□□□ -1.67
COL1A1P02452 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL1A1P02452 AC245052.5-201ENST00000416320 649 ntBASIC4.63□□□□□ -1.67
COL1A1P02452 AL390879.2-203ENST00000426943 1121 ntBASIC4.63□□□□□ -1.67
COL1A1P02452 AL159987.2-201ENST00000432754 307 ntBASIC4.63□□□□□ -1.67
COL1A1P02452 VN1R25P-201ENST00000443385 738 ntBASIC4.63□□□□□ -1.67
COL1A1P02452 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.63□□□□□ -1.67
COL1A1P02452 VN1R40P-201ENST00000455196 941 ntBASIC4.63□□□□□ -1.67
COL1A1P02452 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.63□□□□□ -1.67
COL1A1P02452 SNORA70.24-201ENST00000517233 118 ntBASIC4.63□□□□□ -1.67
COL1A1P02452 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.63□□□□□ -1.67
COL1A1P02452 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.63□□□□□ -1.67
COL1A1P02452 OR8I1P-201ENST00000529291 931 ntBASIC4.63□□□□□ -1.67
COL1A1P02452 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.63□□□□□ -1.67
COL1A1P02452 AC012603.1-201ENST00000606424 528 ntBASIC4.63□□□□□ -1.67
COL1A1P02452 MIR7975-201ENST00000619350 68 ntBASIC4.63□□□□□ -1.67
COL1A1P02452 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL1A1P02452 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL1A1P02452 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL1A1P02452 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL1A1P02452 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
COL1A1P02452 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL1A1P02452 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
COL1A1P02452 RNA5SP51-201ENST00000364750 119 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 RHOT1P2-201ENST00000366423 333 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 MIR634-201ENST00000385208 97 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.62□□□□□ -1.67
COL1A1P02452 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.62□□□□□ -1.67
COL1A1P02452 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL1A1P02452 AC084198.1-201ENST00000477747 402 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 AC106707.2-201ENST00000484182 374 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 AL358832.1-201ENST00000497800 389 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 AC104619.4-201ENST00000510773 249 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 AC074250.1-201ENST00000511117 192 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.62□□□□□ -1.67
COL1A1P02452 AC119751.5-201ENST00000514077 770 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 RNA5SP164-201ENST00000516533 110 ntBASIC4.62□□□□□ -1.67
COL1A1P02452 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.62□□□□□ -1.67
COL1A1P02452 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.62□□□□□ -1.67
COL1A1P02452 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms