Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNU6-1242P-201ENST00000391052 103 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AL109941.1-201ENST00000401925 229 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 ERHP2-201ENST00000402323 299 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AL589647.1-201ENST00000402485 466 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-2O95096 OR2X1P-201ENST00000421144 687 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AC007559.1-201ENST00000428736 355 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 MOB1AP1-201ENST00000430903 535 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-2O95096 RPS20P1-201ENST00000434853 354 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC004938.1-201ENST00000438468 308 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 ELOCP13-201ENST00000443934 329 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NKX2-2O95096 RPL7P59-201ENST00000447700 943 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC004022.1-201ENST00000447766 1066 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-2O95096 RPL23AP15-201ENST00000450202 459 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 OR52J1P-201ENST00000450596 932 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-2O95096 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-2O95096 MTND6P6-201ENST00000478031 263 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC011037.1-201ENST00000483964 558 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-2O95096 DYNLL1P6-201ENST00000503440 264 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC114322.1-201ENST00000506771 926 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 RPL7L1P13-201ENST00000511702 739 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 RN7SKP287-201ENST00000516546 266 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 Y_RNA.717-201ENST00000517106 92 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-2O95096 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 OR5M2P-201ENST00000529003 936 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC021006.3-201ENST00000530771 192 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AP001317.1-201ENST00000531194 960 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-2O95096 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-2O95096 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.45□□□□□ -1.7
NKX2-2O95096 MTND4P33-201ENST00000556706 766 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC087477.6-201ENST00000559595 843 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AC023813.2-201ENST00000564321 469 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC093249.4-201ENST00000564755 259 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 MIR5699-201ENST00000578903 90 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.45□□□□□ -1.7
NKX2-2O95096 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AC008687.2-201ENST00000597865 520 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC022022.2-201ENST00000602989 360 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-2O95096 AC006363.1-201ENST00000603806 463 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AC021749.1-201ENST00000604322 607 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-2O95096 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.45□□□□□ -1.7
NKX2-2O95096 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.45□□□□□ -1.7
NKX2-2O95096 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 ZFRP1-201ENST00000457579 2970 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 DBF4P1-201ENST00000412976 1892 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NKX2-2O95096 XPOTP1-201ENST00000443317 2398 ntBASIC4.45□□□□□ -1.7
NKX2-2O95096 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 AL731566.1-201ENST00000620490 1937 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 SAMMSON-226ENST00000642089 1582 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 NCLP2-201ENST00000416078 1462 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
NKX2-2O95096 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NKX2-2O95096 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 MTND4P8-201ENST00000514997 1362 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 RNU4-28P-201ENST00000364739 141 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NKX2-2O95096 SNORA51.8-201ENST00000384234 132 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 ARL4AP5-201ENST00000404372 599 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 RN7SKP278-201ENST00000410504 342 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 RPL36AP10-201ENST00000421785 322 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-2O95096 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.44□□□□□ -1.7
NKX2-2O95096 Z93242.1-201ENST00000427102 353 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.44□□□□□ -1.7
NKX2-2O95096 MTCO1P54-201ENST00000430139 712 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-2O95096 PTMAP6-201ENST00000439110 327 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-2O95096 AL031584.1-201ENST00000447169 754 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-2O95096 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.44□□□□□ -1.7
NKX2-2O95096 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.44□□□□□ -1.7
NKX2-2O95096 RPS5P7-201ENST00000456664 608 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 RPL7P16-201ENST00000479738 738 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 VPS26AP1-201ENST00000483197 979 ntBASIC4.44□□□□□ -1.7
NKX2-2O95096 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms