Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC010486.2-201ENST00000505572 483 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.38□□□□□ -1.71
ZIC3O60481 RPS27AP18-201ENST00000515536 459 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.38□□□□□ -1.71
ZIC3O60481 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.38□□□□□ -1.71
ZIC3O60481 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.38□□□□□ -1.71
ZIC3O60481 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.38□□□□□ -1.71
ZIC3O60481 AP001880.2-201ENST00000538233 448 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AC091515.1-201ENST00000548110 679 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.38□□□□□ -1.71
ZIC3O60481 SETP1-201ENST00000556014 845 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 UBE2FP2-201ENST00000566646 462 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AC009852.2-201ENST00000567898 485 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 MIR3667-201ENST00000581025 74 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.38□□□□□ -1.71
ZIC3O60481 AL137072.1-201ENST00000603444 466 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.38□□□□□ -1.71
ZIC3O60481 AP004247.3-201ENST00000608682 624 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AC116651.1-201ENST00000609724 556 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AL450489.1-201ENST00000612071 468 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AC243654.2-201ENST00000612843 443 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AC093783.1-201ENST00000612976 329 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.38□□□□□ -1.71
ZIC3O60481 AC105227.2-201ENST00000615075 605 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.38□□□□□ -1.71
ZIC3O60481 AC073869.10-201ENST00000642016 354 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.38□□□□□ -1.71
ZIC3O60481 AC093775.1-201ENST00000624154 1868 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZIC3O60481 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
ZIC3O60481 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZIC3O60481 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ZIC3O60481 AC073136.1-201ENST00000449426 2884 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZIC3O60481 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZIC3O60481 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
ZIC3O60481 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZIC3O60481 AC119744.1-201ENST00000454746 1715 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 AC009643.2-201ENST00000603543 1448 ntBASIC4.38□□□□□ -1.71
ZIC3O60481 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.38□□□□□ -1.71
ZIC3O60481 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZIC3O60481 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZIC3O60481 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
ZIC3O60481 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 OR5H2-201ENST00000355273 945 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZIC3O60481 RNU6-560P-201ENST00000364007 108 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 RNU6-304P-201ENST00000364855 107 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ZIC3O60481 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ZIC3O60481 SNORD116-8-201ENST00000384365 95 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.37□□□□□ -1.71
ZIC3O60481 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 RN7SKP100-201ENST00000411258 284 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 NRBF2P3-201ENST00000432731 865 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 RPS17P8-201ENST00000434525 335 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 OR1H1P-201ENST00000448731 937 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC002553.2-201ENST00000453217 340 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 RNU6-1218P-201ENST00000458990 108 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.37□□□□□ -1.71
ZIC3O60481 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 RPS27P23-201ENST00000487608 251 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 RPL5P23-201ENST00000496040 868 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 AC093755.1-201ENST00000512950 1023 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 RN7SKP283-201ENST00000517197 270 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 RNU6-709P-201ENST00000517257 104 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC008562.1-201ENST00000521763 330 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 C1GALT1P3-201ENST00000522049 819 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ZIC3O60481 PDCL2P2-201ENST00000533651 189 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC133555.2-201ENST00000550213 292 ntBASIC4.37□□□□□ -1.71
ZIC3O60481 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.37□□□□□ -1.71
ZIC3O60481 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms