Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL732292.1-201ENST00000426692 226 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.3□□□□□ -1.72
RIPK2O43353 MTCO1P54-201ENST00000430139 712 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.3□□□□□ -1.72
RIPK2O43353 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.3□□□□□ -1.72
RIPK2O43353 MTND2P25-201ENST00000449028 610 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.3□□□□□ -1.72
RIPK2O43353 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.3□□□□□ -1.72
RIPK2O43353 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.3□□□□□ -1.72
RIPK2O43353 AC096992.1-201ENST00000459808 709 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.3□□□□□ -1.72
RIPK2O43353 AC109458.1-201ENST00000508858 316 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 AC147055.3-201ENST00000510547 851 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 Vault.1-201ENST00000516474 102 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 IGKV2-38-201ENST00000517443 247 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 AC107016.1-201ENST00000550463 337 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.3□□□□□ -1.72
RIPK2O43353 AL445222.1-201ENST00000607259 628 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 AL713922.2-201ENST00000619384 716 ntBASIC4.3□□□□□ -1.72
RIPK2O43353 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
RIPK2O43353 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIPK2O43353 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
RIPK2O43353 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.3□□□□□ -1.72
RIPK2O43353 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.3□□□□□ -1.72
RIPK2O43353 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.29□□□□□ -1.72
RIPK2O43353 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RIPK2O43353 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.29□□□□□ -1.72
RIPK2O43353 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RIPK2O43353 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RIPK2O43353 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RIPK2O43353 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.29□□□□□ -1.72
RIPK2O43353 MIR153-1-201ENST00000384914 90 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 AL583835.1-201ENST00000399570 407 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 AL589655.1-201ENST00000405398 482 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 RPL7AP25-201ENST00000423357 805 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.29□□□□□ -1.72
RIPK2O43353 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.29□□□□□ -1.72
RIPK2O43353 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.29□□□□□ -1.72
RIPK2O43353 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.29□□□□□ -1.72
RIPK2O43353 AC091685.2-201ENST00000454924 864 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 AL133477.1-201ENST00000457472 514 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 AC110749.1-201ENST00000462007 357 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 RPL12P20-201ENST00000475538 479 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 RPL31P61-201ENST00000496160 376 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.29□□□□□ -1.72
RIPK2O43353 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.29□□□□□ -1.72
RIPK2O43353 VN1R79P-201ENST00000593540 513 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 AC245128.3-201ENST00000594721 748 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 HMGB1P50-201ENST00000605814 607 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 AC026368.1-201ENST00000614934 690 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.29□□□□□ -1.72
RIPK2O43353 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.29□□□□□ -1.72
RIPK2O43353 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RIPK2O43353 NMD3P1-201ENST00000439704 1488 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 AC095050.2-201ENST00000510748 1458 ntBASIC4.29□□□□□ -1.72
RIPK2O43353 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RIPK2O43353 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.29□□□□□ -1.72
RIPK2O43353 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.28□□□□□ -1.72
RIPK2O43353 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.28□□□□□ -1.72
RIPK2O43353 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK2O43353 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RIPK2O43353 AC007685.1-201ENST00000329806 452 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 MIR3074-201ENST00000384885 81 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 AL109941.1-201ENST00000401925 229 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.28□□□□□ -1.72
RIPK2O43353 SNORA11.3-201ENST00000408471 128 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 RNU2-65P-201ENST00000410162 185 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 AC004987.3-201ENST00000413879 771 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.28□□□□□ -1.72
RIPK2O43353 AL391219.1-201ENST00000422570 483 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 USP9YP7-201ENST00000436723 430 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.28□□□□□ -1.72
RIPK2O43353 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK2O43353 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.28□□□□□ -1.72
RIPK2O43353 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.28□□□□□ -1.72
RIPK2O43353 CEACAMP6-201ENST00000452007 574 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 USP9YP32-201ENST00000452432 430 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 AL121877.1-201ENST00000453704 622 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 AP000873.1-201ENST00000463987 400 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 AC087385.1-201ENST00000475062 312 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.28□□□□□ -1.72
RIPK2O43353 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.28□□□□□ -1.72
RIPK2O43353 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.28□□□□□ -1.72
RIPK2O43353 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.28□□□□□ -1.72
RIPK2O43353 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.28□□□□□ -1.72
RIPK2O43353 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK2O43353 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.28□□□□□ -1.72
RIPK2O43353 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.28□□□□□ -1.72
RIPK2O43353 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.28□□□□□ -1.72
RIPK2O43353 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.28□□□□□ -1.72
RIPK2O43353 AP000919.1-202ENST00000581139 1264 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 MIR4310-201ENST00000582950 57 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.28□□□□□ -1.72
RIPK2O43353 MIR6864-201ENST00000617935 70 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 AL645927.2-201ENST00000618350 349 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 SNORA11.6-201ENST00000619030 128 ntBASIC4.28□□□□□ -1.72
RIPK2O43353 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RIPK2O43353 AC002044.3-201ENST00000623314 541 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms