Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNA5SP498-201ENST00000411342 120 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AL355994.1-201ENST00000424379 260 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AC009965.2-201ENST00000425328 970 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.13□□□□□ -1.75
LSM1O15116 HMGB3P5-201ENST00000428894 612 ntBASIC4.13□□□□□ -1.75
LSM1O15116 USP9YP9-201ENST00000429406 715 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AL606490.7-201ENST00000433136 191 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AL132765.1-201ENST00000434165 553 ntBASIC4.13□□□□□ -1.75
LSM1O15116 RPS26P40-201ENST00000435209 294 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.13□□□□□ -1.75
LSM1O15116 MTCYBP12-201ENST00000440559 1134 ntBASIC4.13□□□□□ -1.75
LSM1O15116 RN7SL354P-201ENST00000469282 294 ntBASIC4.13□□□□□ -1.75
LSM1O15116 RPL21P126-201ENST00000470049 478 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AC007537.2-201ENST00000472093 511 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AC010683.1-201ENST00000473673 378 ntBASIC4.13□□□□□ -1.75
LSM1O15116 RPL7P47-201ENST00000497299 556 ntBASIC4.13□□□□□ -1.75
LSM1O15116 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.13□□□□□ -1.75
LSM1O15116 AC021087.2-201ENST00000504656 1203 ntBASIC4.13□□□□□ -1.75
LSM1O15116 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LSM1O15116 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LSM1O15116 OR5D15P-201ENST00000531671 942 ntBASIC4.13□□□□□ -1.75
LSM1O15116 UBTFL9-201ENST00000534504 1148 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.13□□□□□ -1.75
LSM1O15116 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.13□□□□□ -1.75
LSM1O15116 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.13□□□□□ -1.75
LSM1O15116 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LSM1O15116 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.13□□□□□ -1.75
LSM1O15116 AL354984.3-201ENST00000604803 325 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AC010857.1-201ENST00000606398 594 ntBASIC4.13□□□□□ -1.75
LSM1O15116 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.13□□□□□ -1.75
LSM1O15116 AC012409.3-201ENST00000611343 981 ntBASIC4.13□□□□□ -1.75
LSM1O15116 MIR6780A-201ENST00000615089 68 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AC011472.4-201ENST00000615848 491 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AP005019.3-201ENST00000620418 560 ntBASIC4.13□□□□□ -1.75
LSM1O15116 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.13□□□□□ -1.75
LSM1O15116 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LSM1O15116 AL592148.3-201ENST00000608771 2646 ntBASIC4.13□□□□□ -1.75
LSM1O15116 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.13□□□□□ -1.75
LSM1O15116 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.13□□□□□ -1.75
LSM1O15116 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.12□□□□□ -1.75
LSM1O15116 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LSM1O15116 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LSM1O15116 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.12□□□□□ -1.75
LSM1O15116 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
LSM1O15116 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.12□□□□□ -1.75
LSM1O15116 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LSM1O15116 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.12□□□□□ -1.75
LSM1O15116 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
LSM1O15116 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LSM1O15116 RNA5SP388-201ENST00000362584 119 ntBASIC4.12□□□□□ -1.75
LSM1O15116 RNA5SP175-201ENST00000364275 119 ntBASIC4.12□□□□□ -1.75
LSM1O15116 SNORD6-201ENST00000365444 73 ntBASIC4.12□□□□□ -1.75
LSM1O15116 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.12□□□□□ -1.75
LSM1O15116 AL133270.1-201ENST00000402635 279 ntBASIC4.12□□□□□ -1.75
LSM1O15116 DHFRP5-201ENST00000406944 564 ntBASIC4.12□□□□□ -1.75
LSM1O15116 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.12□□□□□ -1.75
LSM1O15116 TMSB10P2-201ENST00000416049 131 ntBASIC4.12□□□□□ -1.75
LSM1O15116 EIF1P3-201ENST00000423841 334 ntBASIC4.12□□□□□ -1.75
LSM1O15116 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.12□□□□□ -1.75
LSM1O15116 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.12□□□□□ -1.75
LSM1O15116 FTH1P16-201ENST00000435241 552 ntBASIC4.12□□□□□ -1.75
LSM1O15116 MTND2P25-201ENST00000449028 610 ntBASIC4.12□□□□□ -1.75
LSM1O15116 AL513533.1-201ENST00000453728 415 ntBASIC4.12□□□□□ -1.75
LSM1O15116 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.12□□□□□ -1.75
LSM1O15116 RPL23AP12-201ENST00000467573 473 ntBASIC4.12□□□□□ -1.75
LSM1O15116 AC087385.1-201ENST00000475062 312 ntBASIC4.12□□□□□ -1.75
LSM1O15116 RN7SL826P-201ENST00000479724 288 ntBASIC4.12□□□□□ -1.75
LSM1O15116 PCNAP1-201ENST00000505363 709 ntBASIC4.12□□□□□ -1.75
LSM1O15116 RNA5SP309-201ENST00000516670 106 ntBASIC4.12□□□□□ -1.75
LSM1O15116 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.12□□□□□ -1.75
LSM1O15116 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.12□□□□□ -1.75
LSM1O15116 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.12□□□□□ -1.75
LSM1O15116 AC063949.1-201ENST00000552900 865 ntBASIC4.12□□□□□ -1.75
LSM1O15116 AC027176.2-201ENST00000559166 746 ntBASIC4.12□□□□□ -1.75
LSM1O15116 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.12□□□□□ -1.75
LSM1O15116 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.12□□□□□ -1.75
LSM1O15116 AL391261.4-201ENST00000616012 481 ntBASIC4.12□□□□□ -1.75
LSM1O15116 AC008785.1-201ENST00000624475 456 ntBASIC4.12□□□□□ -1.75
LSM1O15116 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LSM1O15116 OR5AC4P-202ENST00000642086 985 ntBASIC4.12□□□□□ -1.75
LSM1O15116 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
LSM1O15116 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.12□□□□□ -1.75
LSM1O15116 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
LSM1O15116 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.12□□□□□ -1.75
LSM1O15116 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
LSM1O15116 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
LSM1O15116 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.11□□□□□ -1.75
LSM1O15116 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
LSM1O15116 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.11□□□□□ -1.75
LSM1O15116 OR56B2P-202ENST00000641377 2453 ntBASIC4.11□□□□□ -1.75
LSM1O15116 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.11□□□□□ -1.75
LSM1O15116 OR5P1P-201ENST00000299512 925 ntBASIC4.11□□□□□ -1.75
LSM1O15116 U3.15-201ENST00000365398 212 ntBASIC4.11□□□□□ -1.75
LSM1O15116 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
LSM1O15116 RNU1-89P-201ENST00000384592 164 ntBASIC4.11□□□□□ -1.75
LSM1O15116 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.11□□□□□ -1.75
LSM1O15116 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.11□□□□□ -1.75
LSM1O15116 RPEP3-201ENST00000425462 676 ntBASIC4.11□□□□□ -1.75
LSM1O15116 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.11□□□□□ -1.75
LSM1O15116 USP9YP7-201ENST00000436723 430 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms