Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC188H7C350 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 MFSD8-213ENST00000641134 1327 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 GLULP6-201ENST00000399502 913 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC188H7C350 EIF4A1P3-201ENST00000411521 244 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 RPS20P14-201ENST00000412545 360 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC188H7C350 AC004074.1-201ENST00000421810 1063 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC188H7C350 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC188H7C350 AC006994.1-201ENST00000438212 839 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 GSTA7P-201ENST00000438425 448 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 ACTR3P2-201ENST00000439585 1257 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC114495.1-201ENST00000441274 436 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC188H7C350 AL096803.2-201ENST00000450032 677 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AL451050.1-201ENST00000450126 415 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AL049829.1-201ENST00000465411 156 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC011037.1-201ENST00000483964 558 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC188H7C350 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.57□□□□□ -1.68
CCDC188H7C350 AC139783.2-201ENST00000504847 1145 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC006499.3-201ENST00000506077 748 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 OR5M14P-201ENST00000506803 618 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC106806.2-201ENST00000509365 500 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.57□□□□□ -1.68
CCDC188H7C350 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC188H7C350 RN7SKP283-201ENST00000517197 270 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC083923.1-201ENST00000523708 376 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.57□□□□□ -1.68
CCDC188H7C350 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.57□□□□□ -1.68
CCDC188H7C350 AC044860.2-201ENST00000561005 179 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC009117.1-201ENST00000563948 554 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC090079.2-201ENST00000575289 768 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC098935.2-201ENST00000604222 466 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 OR2BH1P-201ENST00000608850 864 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC123768.4-201ENST00000616244 701 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC008785.1-201ENST00000624475 456 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC106730.3-201ENST00000624568 641 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 AC016717.3-201ENST00000624730 554 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 C4BPAP1-201ENST00000415474 1893 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CCDC188H7C350 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CCDC188H7C350 AC134882.1-201ENST00000603738 1676 ntBASIC4.57□□□□□ -1.68
CCDC188H7C350 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC188H7C350 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 MFSD8-242ENST00000641690 4199 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC188H7C350 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC188H7C350 SNORD66.1-201ENST00000391230 76 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 JKAMPP1-201ENST00000413804 919 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC188H7C350 AL512637.2-201ENST00000431287 1256 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC188H7C350 RPS27AP17-201ENST00000463344 455 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC092902.1-201ENST00000486999 259 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC231760.1-201ENST00000498002 260 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC108145.1-201ENST00000503770 153 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC113430.1-201ENST00000506872 718 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 IGBP1P5-201ENST00000507524 1000 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC188H7C350 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC188H7C350 AC008562.1-201ENST00000521763 330 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC188H7C350 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC188H7C350 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CCDC188H7C350 AL352979.3-201ENST00000553515 247 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC188H7C350 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC188H7C350 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC188H7C350 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC188H7C350 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC188H7C350 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 AC104072.1-201ENST00000568817 668 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 MIR3667-201ENST00000581025 74 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC188H7C350 AL158196.1-201ENST00000616786 434 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC078880.5-201ENST00000617845 421 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC018445.2-201ENST00000622987 260 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AP003072.4-201ENST00000624580 310 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 AC006065.6-201ENST00000625201 545 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC188H7C350 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 AL132640.2-201ENST00000559968 1698 ntBASIC4.56□□□□□ -1.68
CCDC188H7C350 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.56□□□□□ -1.68
CCDC188H7C350 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC188H7C350 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC188H7C350 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms