Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 RPL36AP10-201ENST00000421785 322 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 RPL12P34-201ENST00000424532 479 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 RPEP3-201ENST00000425462 676 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 RPL34P6-201ENST00000432390 345 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC073143.1-201ENST00000436316 395 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 SDR42E1P3-201ENST00000438345 502 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 RPS26P30-201ENST00000443431 335 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 DNAJC19P8-201ENST00000452887 259 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 CYCSP34-201ENST00000458172 304 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC090142.1-201ENST00000465776 462 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 RPS4XP6-201ENST00000477670 797 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 MTND6P6-201ENST00000478031 263 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 UBA52P3-201ENST00000491303 382 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC026979.1-201ENST00000492525 396 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC025164.1-201ENST00000496249 478 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 COX6B1P6-201ENST00000522347 255 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AP003066.2-201ENST00000529375 555 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AP001781.1-201ENST00000530977 207 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC087894.1-201ENST00000538359 518 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 CYB5AP5-201ENST00000549779 389 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC023825.1-201ENST00000566704 1030 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 RN7SL435P-201ENST00000584418 282 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AL133338.2-201ENST00000604292 736 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC018645.2-201ENST00000609151 472 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC083809.1-201ENST00000615051 472 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 MIR8069-1-201ENST00000616627 86 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 MIR8069-2-201ENST00000621412 86 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AC004232.3-201ENST00000622977 525 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 AP003476.1-201ENST00000623984 516 ntBASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.22□□□□□ -1.73
NPIPA3F8WFD2 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.21□□□□□ -1.73
NPIPA3F8WFD2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NPIPA3F8WFD2 AC092162.3-201ENST00000624511 1624 ntBASIC4.21□□□□□ -1.73
NPIPA3F8WFD2 USP9YP4-201ENST00000424401 1745 ntBASIC4.21□□□□□ -1.73
NPIPA3F8WFD2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 ZNF137P-201ENST00000456718 1920 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AL731566.1-201ENST00000620490 1937 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 MAPK10-303ENST00000641324 3959 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 OR51H2P-202ENST00000641424 3046 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 OR10J6P-201ENST00000289731 930 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 MIR525-201ENST00000384978 85 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AL590762.2-201ENST00000395798 571 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 ATP5F1P2-201ENST00000398143 760 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 RPL31P52-201ENST00000407532 367 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 EIF4A1P3-201ENST00000411521 244 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC241520.1-201ENST00000422654 1099 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AL357520.1-201ENST00000441557 453 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC044797.1-201ENST00000445744 679 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AL031584.1-201ENST00000447169 754 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 APOOP2-201ENST00000461561 539 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC104763.1-201ENST00000475274 360 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 RN7SKP46-201ENST00000515942 234 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 RN7SKP283-201ENST00000517197 270 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 PDCD5P1-201ENST00000543528 309 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 FKBP1BP1-201ENST00000553366 325 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 AC126365.2-201ENST00000580630 379 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 BNIP3P27-201ENST00000599991 412 ntBASIC4.21□□□□□ -1.74
NPIPA3F8WFD2 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms