Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
TMEM88BA6NKF7 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
TMEM88BA6NKF7 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
TMEM88BA6NKF7 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC6.9□□□□□ -1.31
TMEM88BA6NKF7 AC005332.9-201ENST00000620266 2921 ntBASIC6.9□□□□□ -1.31
TMEM88BA6NKF7 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
TMEM88BA6NKF7 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.31
TMEM88BA6NKF7 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
TMEM88BA6NKF7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
TMEM88BA6NKF7 AC092821.2-201ENST00000545710 2042 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 RNA5SP131-201ENST00000365452 119 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 Y_RNA.390-201ENST00000383932 102 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 RNU1-77P-201ENST00000390868 162 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC013442.1-201ENST00000397347 228 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 UBE2V1P14-201ENST00000415815 558 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 PIGFP2-201ENST00000421400 651 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC245028.1-201ENST00000423259 256 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 TRAPPC2P5-201ENST00000426293 308 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 RPS27AP6-201ENST00000427962 448 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 FCF1P1-201ENST00000432690 571 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 HMGB1P31-201ENST00000437242 427 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AL662791.1-201ENST00000441992 928 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 NFU1P2-201ENST00000448700 469 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 MTCO3P20-201ENST00000454926 688 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC104164.1-201ENST00000460282 590 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 RN7SL738P-201ENST00000470264 297 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC083982.1-201ENST00000485679 344 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 RNU6-1003P-201ENST00000517099 105 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 NPM1P42-201ENST00000560329 862 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 DUXAP4-201ENST00000603046 613 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC068880.5-201ENST00000624331 290 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 FAM157B-203ENST00000639350 358 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC117529.2-201ENST00000512159 2068 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AC130304.1-201ENST00000622942 2385 ntBASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.89□□□□□ -1.31
TMEM88BA6NKF7 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC105235.1-201ENST00000623208 1816 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 RNU6-777P-201ENST00000364265 104 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 MIR23A-201ENST00000385245 73 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 CCNG1P1-201ENST00000406783 885 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 TPMTP2-201ENST00000414372 726 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 RPL6P29-201ENST00000414863 865 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 RPS4XP5-201ENST00000419038 768 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AL109913.1-201ENST00000421173 514 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC012498.1-201ENST00000424037 437 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AL031736.2-201ENST00000426573 787 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 LDHAP2-201ENST00000437325 985 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC243772.1-201ENST00000451620 410 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 RPS29P33-201ENST00000456717 146 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 RAD51AP1P1-201ENST00000484195 1001 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC009120.1-201ENST00000493458 473 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 RNU6-347P-201ENST00000516658 105 ntBASIC6.88□□□□□ -1.31
TMEM88BA6NKF7 RNA5SP400-201ENST00000517155 111 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms