Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 AC096656.1-201ENST00000623826 1364 ntBASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV7S3A2A0A539 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 MAPK10-349ENST00000641767 3661 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC109780.1-201ENST00000451768 1344 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 HSPA8P18-201ENST00000439846 1928 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 SNORA74A-201ENST00000364089 198 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 RNU6-707P-201ENST00000364647 95 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 RNA5SP151-201ENST00000365632 117 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 OR1L1-202ENST00000373686 1083 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 MIR16-1-201ENST00000385271 89 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 RN7SKP167-201ENST00000411047 285 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 DPPA2P3-201ENST00000411853 655 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 RPL21P43-201ENST00000425440 472 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 PSMD10P3-201ENST00000437000 448 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 COX7BP2-201ENST00000437976 242 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 OR6K5P-201ENST00000447050 945 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC108463.1-201ENST00000450258 347 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 OR52J1P-201ENST00000450596 932 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC022431.1-201ENST00000450941 438 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 SEPT7P3-201ENST00000455017 621 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC011979.1-201ENST00000472300 483 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 RPSAP50-201ENST00000481955 852 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 SCARNA22-201ENST00000503991 125 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 RNA5SP446-201ENST00000515955 82 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 OR5AZ1P-201ENST00000527448 943 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC012321.1-201ENST00000561622 1588 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC008088.1-201ENST00000580993 280 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC087763.1-201ENST00000603391 286 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 SGO1P1-201ENST00000603525 1447 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC114878.2-201ENST00000604863 1251 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AL139344.1-201ENST00000605228 195 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AP000255.1-201ENST00000610276 676 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AL121612.2-201ENST00000612261 482 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 uc_338.18-201ENST00000615451 175 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 MIR6826-201ENST00000617808 98 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AL157770.1-201ENST00000623049 439 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC091905.4-201ENST00000623432 202 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AP001284.1-201ENST00000528393 2118 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC025263.3-201ENST00000622965 1396 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AC020633.1-201ENST00000468439 2247 ntBASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TCRBV7S3A2A0A539 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC104454.1-201ENST00000421341 1401 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AL136164.3-201ENST00000624429 3978 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 NACA3P-201ENST00000359690 648 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 RNA5SP305-201ENST00000362665 119 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AC093719.1-202ENST00000392735 373 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 RN7SKP229-201ENST00000410465 302 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 RSU1P3-201ENST00000412878 835 ntBASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.75□□□□□ -1.65
TCRBV7S3A2A0A539 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms