Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC005539.1-201ENST00000443768 1479 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 SNURFL-201ENST00000309296 343 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 RNA5SP80-201ENST00000410475 111 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 TBCAP2-201ENST00000416175 326 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 MRPS36P1-201ENST00000421291 307 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 RPL7P57-201ENST00000423238 740 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 DPRXP1-201ENST00000426312 460 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AL009174.1-201ENST00000426577 416 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 MTCO1P54-201ENST00000430139 712 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC004938.1-201ENST00000438468 308 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AL591503.2-201ENST00000442314 1005 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 MTCO2P25-201ENST00000447065 681 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 MTCO3P16-201ENST00000454456 754 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AL389915.2-201ENST00000454576 441 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC096741.1-201ENST00000472250 846 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 HMGN2P25-201ENST00000486956 268 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 DEFB109F-201ENST00000491870 277 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 DYNLL1P6-201ENST00000503440 264 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC109445.1-201ENST00000512356 383 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 RPL7L1P4-201ENST00000513004 707 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 RN7SKP260-201ENST00000516907 149 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 HMGB1P23-201ENST00000518743 568 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC020937.1-201ENST00000519677 1013 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 MIR3915-201ENST00000578518 97 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC011447.4-201ENST00000587562 111 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 VN1R90P-201ENST00000595717 726 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC010424.2-201ENST00000607594 443 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 MIR6778-201ENST00000617912 73 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC012414.7-202ENST00000622705 1090 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 FP325313.1-201ENST00000638228 703 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC087359.1-201ENST00000508335 1740 ntBASIC4.58□□□□□ -1.68
TRBV5-3A0A0A0MS03 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 SGO1P1-201ENST00000603525 1447 ntBASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 HMGB1P5-201ENST00000255320 642 ntBASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 RNU6-1200P-201ENST00000384162 107 ntBASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 Y_RNA.505-201ENST00000384489 102 ntBASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 Y_RNA.560-201ENST00000384689 102 ntBASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 MIR16-1-201ENST00000385271 89 ntBASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 SNORD96B-201ENST00000386148 79 ntBASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 SNORD65.1-201ENST00000390889 71 ntBASIC4.57□□□□□ -1.68
TRBV5-3A0A0A0MS03 AL355379.1-201ENST00000405542 640 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms