Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MIR3915-201ENST00000578518 97 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC018714.1-201ENST00000605028 208 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC135507.1-201ENST00000607214 561 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AL133481.2-203ENST00000607558 139 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC116651.1-201ENST00000609724 556 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC007786.3-201ENST00000615154 596 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 AC104260.2-201ENST00000623551 3497 ntBASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHGA3Q9Y5H0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 STX3-208ENST00000641815 3236 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC107081.3-201ENST00000612715 2034 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AL451142.2-201ENST00000429076 2090 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 Y_RNA.560-201ENST00000384689 102 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC073264.1-201ENST00000411508 416 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 USP9YP33-201ENST00000412220 421 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 Z99497.1-201ENST00000421282 135 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC009237.2-201ENST00000421358 284 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 RPP40P1-201ENST00000426762 456 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AL353597.2-202ENST00000434901 373 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 USP9YP35-201ENST00000435696 412 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC129850.1-201ENST00000436203 508 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 MTCO2P7-201ENST00000446518 666 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 USP9YP10-201ENST00000454868 628 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 RN7SL329P-201ENST00000467740 299 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC010301.1-201ENST00000473936 355 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 RAP1BP2-201ENST00000478270 544 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC079841.1-201ENST00000481228 950 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 RPS21P4-201ENST00000487122 248 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC069304.1-201ENST00000491593 704 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC023424.1-201ENST00000496058 459 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 KRT19P6-201ENST00000510983 209 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 USP9YP5-201ENST00000511770 630 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AL121766.1-201ENST00000547436 487 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC024909.2-201ENST00000553035 286 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AF131215.7-201ENST00000602443 707 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 Z69908.1-201ENST00000622603 247 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 OR5BR1P-201ENST00000524992 1330 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AC073429.2-201ENST00000569694 1444 ntBASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDHGA3Q9Y5H0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDHGA3Q9Y5H0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms