Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 VN1R34P-201ENST00000447387 883 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 RPS26P3-201ENST00000470205 348 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AC090543.2-201ENST00000483963 348 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AC004057.1-201ENST00000485827 348 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 RPL29P14-201ENST00000495837 428 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AC084759.1-201ENST00000561168 290 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC88CQ9P219 AC091167.4-201ENST00000605079 184 ntBASIC3.77□□□□□ -1.81
CCDC88CQ9P219 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 RNU11-4P-201ENST00000391149 133 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 AL139039.2-201ENST00000407436 479 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 AL590806.1-201ENST00000415818 853 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 NPM1P34-201ENST00000428821 893 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 RPL7P1-201ENST00000468161 747 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 RPL7P9-201ENST00000468715 747 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 AC022336.1-201ENST00000475510 337 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 MIR4444-1-201ENST00000581696 74 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 MIR4444-2-201ENST00000584390 74 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 AC131238.1-201ENST00000617135 328 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 AC034229.5-201ENST00000624258 185 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 CDY11P-201ENST00000447168 1651 ntBASIC3.76□□□□□ -1.81
CCDC88CQ9P219 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC88CQ9P219 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 RNU2-22P-201ENST00000411266 212 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC022034.3-201ENST00000471393 478 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC008011.1-201ENST00000545989 227 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AL354798.1-201ENST00000622505 329 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC079298.2-201ENST00000623885 459 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AL356121.2-201ENST00000624715 780 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 SNORD46.1-201ENST00000364139 104 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 RNA5SP387-201ENST00000364226 106 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AL672167.2-201ENST00000377164 879 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 RNU4-6P-201ENST00000410804 122 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 RNA5SP39-201ENST00000411245 120 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 LINC01881-201ENST00000416103 412 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 HLA-N-201ENST00000437516 135 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 HMGB1P37-201ENST00000439613 609 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AL451050.1-201ENST00000450126 415 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC109458.1-201ENST00000508858 316 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC106785.1-201ENST00000565935 262 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AP005901.4-201ENST00000577336 569 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC015726.1-201ENST00000602353 681 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 AC114878.2-201ENST00000604863 1251 ntBASIC3.75□□□□□ -1.81
CCDC88CQ9P219 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC88CQ9P219 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 RNU1-85P-201ENST00000364127 164 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 SOD2P1-201ENST00000396543 562 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 RNA5SP104-201ENST00000410989 118 ntBASIC3.74□□□□□ -1.81
CCDC88CQ9P219 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC88CQ9P219 AC083863.1-201ENST00000438811 231 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms