Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RN7SKP34-201ENST00000516142 244 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC084759.1-201ENST00000561168 290 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC104229.1-201ENST00000561364 255 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 RPL26P30-202ENST00000602923 645 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AL161729.3-201ENST00000603533 673 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC021851.1-201ENST00000608537 1082 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC019193.2-201ENST00000610012 634 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 AC116158.1-201ENST00000560231 2129 ntBASIC4.52□□□□□ -1.69
SIX2Q9NPC8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SIX2Q9NPC8 SAMMSON-213ENST00000641336 1521 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC068254.2-201ENST00000623938 3577 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 P2RY10P2-201ENST00000416730 913 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 Z80107.1-201ENST00000436830 412 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC006994.1-201ENST00000438212 839 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 ELOCP8-201ENST00000439309 332 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC004854.1-201ENST00000440356 349 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 ELOCP15-201ENST00000442090 332 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC239798.3-201ENST00000454459 408 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 RPL7AP52-201ENST00000458096 790 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC011276.1-201ENST00000469688 323 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC118282.1-201ENST00000506408 765 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC124283.4-201ENST00000581815 456 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 MIR5096-201ENST00000583713 70 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC078880.5-201ENST00000617845 421 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 MIR7702-201ENST00000621931 59 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC008993.2-201ENST00000631744 806 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 MTND5P11-201ENST00000511037 1812 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC016588.2-201ENST00000632484 3021 ntBASIC4.51□□□□□ -1.69
SIX2Q9NPC8 AC008432.1-201ENST00000615912 1320 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL161909.1-201ENST00000397390 712 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL034403.1-201ENST00000399414 885 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 VN1R51P-201ENST00000411675 945 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 RPL12P34-201ENST00000424532 479 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC114973.1-201ENST00000429057 632 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 PTMAP3-201ENST00000447474 330 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 CYCSP42-201ENST00000450823 238 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 Z95152.1-201ENST00000453556 656 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC104982.1-201ENST00000478775 574 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC098583.1-201ENST00000480875 255 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 ASNSP4-201ENST00000511103 447 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AC008507.2-201ENST00000588402 1176 ntBASIC4.5□□□□□ -1.69
SIX2Q9NPC8 AL356218.2-201ENST00000605264 187 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms