Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 AC021451.1-201ENST00000523498 1129 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 AC104417.1-201ENST00000523974 751 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 OR8I1P-201ENST00000529291 931 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 CYP2C60P-201ENST00000566088 139 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 AC096947.1-201ENST00000603233 470 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 AC020910.3-201ENST00000603701 874 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 Z82195.1-201ENST00000604558 398 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 AC073387.2-201ENST00000604797 784 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 AC015908.5-201ENST00000623289 343 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 OR2L1P-202ENST00000641567 1023 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 AL049737.1-201ENST00000413920 1403 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 Z98755.1-201ENST00000407015 1384 ntBASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.78□□□□□ -1.64
POLR1BQ9H9Y6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.78□□□□□ -1.65
POLR1BQ9H9Y6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.78□□□□□ -1.65
POLR1BQ9H9Y6 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC139713.2-215ENST00000641428 5037 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 ANKRD36P1-201ENST00000344424 659 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AL390316.1-201ENST00000406279 553 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 MTATP6P31-201ENST00000406985 692 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC093414.1-201ENST00000434712 514 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 RPL7AP61-201ENST00000443410 636 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 TCEA1P1-201ENST00000449716 880 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC104164.3-201ENST00000467363 1258 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC103987.1-201ENST00000473394 348 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC073073.1-201ENST00000493920 463 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC008837.1-201ENST00000511513 412 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 RNU6-276P-201ENST00000516114 96 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AP001880.2-201ENST00000538233 448 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC018552.3-201ENST00000567416 561 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC005377.1-201ENST00000605126 456 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AP005432.2-201ENST00000608162 586 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC108359.1-201ENST00000616451 1211 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AL121594.5-201ENST00000631724 573 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC107068.1-201ENST00000563286 4218 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 USP9YP4-201ENST00000424401 1745 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AL353743.4-201ENST00000422653 1547 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 ASNSP1-204ENST00000641977 1664 ntBASIC4.77□□□□□ -1.65
POLR1BQ9H9Y6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AL034370.1-201ENST00000397254 1590 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AL603865.2-201ENST00000401679 213 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AL035079.1-201ENST00000405210 287 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 RNU6-77P-201ENST00000410554 91 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 BX510359.2-201ENST00000417920 305 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 E2F6P2-201ENST00000420708 748 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 RPL21P110-201ENST00000433345 446 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 PTGES3P1-201ENST00000439531 483 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AP000942.1-201ENST00000463969 747 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 PPIAP21-201ENST00000464473 501 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC108751.2-201ENST00000469993 231 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC006511.1-201ENST00000470614 315 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AK3P4-201ENST00000504283 583 ntBASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.76□□□□□ -1.65
POLR1BQ9H9Y6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms