Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC083829.1-201ENST00000503756 657 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 RNA5SP73-201ENST00000516744 108 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC234771.5-201ENST00000600161 514 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC005191.1-201ENST00000603950 358 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 AC116651.1-201ENST00000609724 556 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 MIR7702-201ENST00000621931 59 ntBASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
LRRC40Q9H9A6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 RNA5SP388-201ENST00000362584 119 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 ELOCP11-201ENST00000436690 332 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 RPL23AP89-201ENST00000439324 255 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 ELOCP16-201ENST00000444494 332 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 Z95152.1-201ENST00000453556 656 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 RPL23AP24-201ENST00000458203 385 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 VWA8P1-201ENST00000510889 176 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC010476.1-201ENST00000519111 851 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC027176.2-201ENST00000559166 746 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 MTCO3P22-201ENST00000603219 784 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC008638.3-201ENST00000603341 463 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AL139395.1-201ENST00000603662 160 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AC008013.2-202ENST00000637965 364 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AL139811.1-201ENST00000424779 2299 ntBASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRC40Q9H9A6 AL356489.2-201ENST00000566968 3528 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 RNA5SP447-201ENST00000363749 119 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 RNA5SP104-201ENST00000410989 118 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 ELOCP19-201ENST00000411919 318 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 LINC01881-201ENST00000416103 412 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 P2RY10P2-201ENST00000416730 913 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC004552.1-201ENST00000419089 348 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 MFSD13B-201ENST00000420133 1290 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 RAD23BP3-201ENST00000454157 1152 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 NDUFA12P1-201ENST00000455914 406 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 RPS20P4-201ENST00000461659 355 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 RPS26P3-201ENST00000470205 348 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC090543.2-201ENST00000483963 348 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC004057.1-201ENST00000485827 348 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 RPL30P11-201ENST00000495304 339 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AC025445.1-201ENST00000502728 300 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.3□□□□□ -1.72
LRRC40Q9H9A6 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms