Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 ERCC6-202ENST00000374127 1782 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 OR10J6P-201ENST00000289731 930 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 RNU4-31P-201ENST00000384211 141 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 OR6C69P-201ENST00000394268 893 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AL161909.1-201ENST00000397390 712 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 OR2X1P-201ENST00000421144 687 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 BTF3P10-201ENST00000433415 495 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC091390.1-201ENST00000433904 331 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC091167.1-201ENST00000492017 396 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC083829.1-201ENST00000503756 657 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 SMARCE1P4-201ENST00000523647 241 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AL049870.4-201ENST00000555741 486 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AL133247.2-201ENST00000603236 482 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC007423.1-201ENST00000605009 627 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC010200.2-201ENST00000605098 235 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AP000843.1-201ENST00000624880 701 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AC026951.1-201ENST00000559530 2459 ntBASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.69□□□□□ -1.66
CCSER1Q9C0I3 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC068254.2-201ENST00000623938 3577 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 MIR513A2-201ENST00000385249 127 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 MIR708-201ENST00000390708 88 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 MRPS33P4-201ENST00000434892 317 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 MTND6P6-201ENST00000478031 263 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC090543.1-201ENST00000492168 485 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC025554.1-201ENST00000505641 188 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC093824.1-201ENST00000508796 343 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 HMGB3P13-201ENST00000511263 607 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 RNU6-1308P-201ENST00000516817 103 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC090819.1-201ENST00000523800 1111 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 UBTFL9-201ENST00000534504 1148 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC067805.1-201ENST00000559344 470 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 KPNA2P3-201ENST00000584190 848 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AL590392.1-201ENST00000604960 446 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 uc_338.9-201ENST00000617424 182 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC009032.1-201ENST00000617574 431 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC139769.3-201ENST00000618383 175 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC074276.2-201ENST00000619891 348 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 LINC00216-201ENST00000623548 1126 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 MIR3653-201ENST00000625572 110 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 MIR6830-201ENST00000636015 70 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC114546.3-201ENST00000623582 1734 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 AC074029.4-201ENST00000624796 1859 ntBASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCSER1Q9C0I3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCSER1Q9C0I3 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms