Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 AL445523.1-201ENST00000451184 1362 ntBASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 AP000526.1-201ENST00000603308 1388 ntBASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 USP9YP4-201ENST00000424401 1745 ntBASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM54Q9BYV2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC092747.4-201ENST00000620519 1861 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 RNA5SP132-201ENST00000364725 118 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 RNU6-621P-201ENST00000364752 109 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 RNU2-50P-201ENST00000410494 143 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC211486.3-201ENST00000412694 621 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 SETP15-201ENST00000412724 337 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 TPT1P2-201ENST00000413105 503 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC007738.1-201ENST00000413892 348 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 MORF4L1P6-201ENST00000418771 268 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 SEPT2P1-201ENST00000419651 180 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC007394.1-201ENST00000421941 531 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AL022400.1-201ENST00000423946 935 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 RPL31P54-201ENST00000429803 370 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC092473.1-201ENST00000441098 221 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 GTF3AP5-201ENST00000442645 697 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 NDUFA5P7-201ENST00000452914 242 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 RPL21P71-201ENST00000465598 459 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 RN7SL814P-201ENST00000487715 300 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC108693.1-201ENST00000496068 432 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 MTCO1P30-201ENST00000515244 580 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 SERPINE4P-201ENST00000554978 281 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC135628.1-201ENST00000568867 534 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC123786.2-201ENST00000603459 275 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AL354760.1-201ENST00000608357 643 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC004948.1-201ENST00000609858 672 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC007204.2-201ENST00000615022 616 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC091931.1-201ENST00000623488 728 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AL049767.1-202ENST00000637826 242 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 OR55B1P-203ENST00000641518 2602 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 AC006210.2-201ENST00000367074 1545 ntBASIC5.13□□□□□ -1.59
TRIM54Q9BYV2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 AC087359.1-201ENST00000508335 1740 ntBASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM54Q9BYV2 RNA5SP435-201ENST00000364044 108 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms